Index

A

aborted (heliport.cwl_execution.models.ExecutionLog attribute) ABOUT_BASE_URL (heliport.core.conf.HeliportAppConf attribute) absolute_job_folder (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) abstract (heliport.core.vocabulary.DATACITE attribute) (heliport.gate_connection.models.GateProject property) acm (heliport.core.vocabulary.DATACITE attribute) action_delete() (heliport.core.custom_views.HeliportObjectListView method) action_edit() (heliport.core.custom_views.HeliportObjectListView method) action_open() (heliport.archive.views.ArchiveView method) (heliport.digital_objects.views.ObjectGraphListView method) (heliport.publication.views.PublicationView method) (heliport.sharelatex.views.LaTeXView method) (heliport.tables.views.TablesView method) actions (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute) add() (heliport.core.app_interaction.ModuleSection method) (heliport.utils.collections.IndexedSet method) add_action() (heliport.utils.table_description.TableDescription method) add_column() (heliport.utils.form_description.FormDescription method) (heliport.utils.table_description.TableDescription method) add_tags() (heliport.cwl_execution.views.JobCreateView method) add_text (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) add_to_graph() (heliport.core.vocabulary_descriptor.LiteralTriple method) (heliport.core.vocabulary_descriptor.PropertyList method) (heliport.core.vocabulary_descriptor.RelationTriple method) (heliport.core.vocabulary_descriptor.TripleDescription method) add_unique_labels() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) addable (heliport.core.app_interaction.ModuleSection property) addable_list (heliport.core.app_interaction.ModuleSection property) affiliation (heliport.core.models.HeliportUser attribute) after_save_attributes (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) AgentIdentifier (heliport.core.vocabulary.DATACITE attribute) AgentIdentifierScheme (heliport.core.vocabulary.DATACITE attribute) all_digital_objects() (heliport.core.utils.queries.ListOfQuerySets method) AlternateResourceIdentifier (heliport.core.vocabulary.DATACITE attribute) API_URL (heliport.core.conf.HeliportHandlesAppConf attribute) APITest (class in heliport.core.tests) append_job_output_text() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) ARBITRARY_CWL (heliport.cwl_execution.models.Executable.ExecutableTypes attribute) ArbitraryCWLListView (class in heliport.cwl_execution.views) ArbitraryCWLModule (class in heliport.cwl_execution.interface) ArbitraryCWLTests (class in heliport.cwl_execution.tests) ArbitraryCWLUpdateView (class in heliport.cwl_execution.views) ArchivalDocument (heliport.core.vocabulary.FABIO attribute)

Archive (class in heliport.archive.models) archive (heliport.core.models.DigitalObject attribute) Archive.DoesNotExist Archive.MultipleObjectsReturned archive_id (heliport.archive.models.Archive attribute) archive_number (heliport.archive.models.Archive attribute) ArchiveConfig (class in heliport.archive.apps) ArchiveDATACITESerializer (class in heliport.archive.serializers) ArchiveModule (class in heliport.archive.interface) (class in heliport.digital_objects.interface) ArchiveSerializer (class in heliport.archive.serializers) ArchiveSerializer.Meta (class in heliport.archive.serializers) ArchiveTests (class in heliport.archive.tests) ArchiveView (class in heliport.archive.views) ArchiveViewSet (class in heliport.archive.views) ark (heliport.core.vocabulary.DATACITE attribute) arxiv (heliport.core.vocabulary.DATACITE attribute) as_dict() (heliport.core.serializers.DATACITESerializer method) (heliport.core.serializers.DigitalObjectDATACITESerializer method) (heliport.tables.models.Table method) (heliport.tables.models.TableCell method) (heliport.tables.models.TableColumn method) (heliport.tables.models.TableRow method) as_form_field() (heliport.core.serializers.MetadataBoundField method) as_html (heliport.core.attribute_description.BoundAttribute property) as_json (heliport.core.attribute_description.BoundAttribute property) as_json() (heliport.core.serializers.DATACITESerializer method) as_list() (heliport.core.utils.queries.ListOfQuerySets method) (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob static method) as_string (heliport.core.attribute_description.BoundAttribute property) assert_not_relation() (in module heliport.core.models) assert_relation() (in module heliport.core.models) assert_relation_truth() (in module heliport.core.models) assertEqualNoOrder() (heliport.core.tests.SearchTest method) at_least_one_department() (in module heliport.core.utils.queries) attr() (heliport.utils.form_description.FormColumn method) Attribute (class in heliport.core.attribute_description) attribute (heliport.core.models.Tag attribute) attribute_id (heliport.core.models.Tag attribute) attribute_model (heliport.core.attribute_description.DynamicAttribute attribute) attribute_type (heliport.core.attribute_description.BaseAttribute attribute) attributes (heliport.core.models.DigitalObject attribute) AttributeType (class in heliport.core.attribute_description) AttrObj (class in heliport.core.attribute_description) AttrObjRDFSerializer (class in heliport.core.serializers) AttrObjT (class in heliport.core.attribute_description) auth_cert (heliport.core.tests.HandleServerInteractionTest attribute) auth_header (heliport.core.tests.HandleServerInteractionTest attribute) auth_token (heliport.core.models.NamedToken attribute) auth_token_id (heliport.core.models.NamedToken attribute) auth_user (heliport.core.models.HeliportUser attribute) auth_user_id (heliport.core.models.HeliportUser attribute) authentication_backend_id (heliport.core.models.HeliportUser attribute) AUTOCOMPLETE_COUNT (heliport.core.conf.HeliportAppConf attribute) AutoValue (class in heliport.cwl_execution.cwl_helpers.cwl_parameter) await_command_result() (heliport.core.utils.command_line_execution.ShellSSHCommandExecutor method)

B

b64_prefix (heliport.core.tests.HandleServerInteractionTest attribute) backend_id (heliport.core.models.Group attribute) base_command_decode_to_str() (in module heliport.cwl_execution.cwl_helpers.cwl_tool) base_command_list_encode() (in module heliport.cwl_execution.cwl_helpers.cwl_tool) base_executable (heliport.cwl_execution.models.Job attribute) base_executable_id (heliport.cwl_execution.models.Job attribute) BaseAttribute (class in heliport.core.attribute_description) basename (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ContributionViewSet attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute)

BasicLiteralType (class in heliport.core.attribute_description) BasicObjType (class in heliport.core.attribute_description) BasicUserInformationManager (class in heliport.core.user_logic.user_information_managers.managers) bibcode (heliport.core.vocabulary.DATACITE attribute) bind() (heliport.utils.form_description.FormColumn method) (heliport.utils.table_description.TableAction method) bind_to() (heliport.core.attribute_description.BaseAttribute method) BooleanParameterValue (class in heliport.cwl_execution.cwl_helpers.cwl_parameter) bound (heliport.utils.form_description.FormItem property) BoundAttribute (class in heliport.core.attribute_description) BoundTableAction (class in heliport.utils.table_description) browser_supported_uri (heliport.data_source.models.DataSource property) build_command_executor() (heliport.core.models.LoginInfo method) build_command_executor_indirection() (heliport.core.models.LoginInfo method) build_index() (heliport.digital_objects.views.ObjectGraphView method) (heliport.utils.collections.IndexedSet method) build_set_attributes_for_role() (in module heliport.core.migrations.0016_insert_core_vocabulary) build_set_role_command() (in module heliport.core.migrations.0011_set_digitalobject_role) build_set_type() (in module heliport.core.migrations.0016_insert_core_vocabulary) build_ssh_shell() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) build_url() (heliport.cwl_execution.tests.WorkflowTests method)

C

CallbackView (class in heliport.unicore.views) casted_as_subclass() (heliport.core.models.DigitalObject method) casted_or_self() (heliport.core.models.DigitalObject method) category (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.models.DigitalObject attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute) category_in_persistent_id (heliport.core.models.DigitalObject property) category_list (heliport.core.models.DigitalObject property) category_str (heliport.core.models.DigitalObject property) cell_id (heliport.tables.models.TableCell attribute) CERTIFICATE_PATH (heliport.core.conf.HeliportHandlesAppConf attribute) check_access_allowed() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) check_new() (heliport.gate_connection.proposal_management.gate_user_management.GateUser method) (heliport.gate_connection.proposal_management.ldap_user_management.LDAPUser method) (heliport.gate_connection.proposal_management.user_management.User method) check_permission() (heliport.cwl_execution.views.ExecutableRawYamlView static method) Class (heliport.core.models.Vocabulary attribute) clean() (in module heliport.cwl_execution.cwl_helpers.cwl_generation) close() (heliport.core.utils.command_line_execution.CommandExecutor method) cmd_options (heliport.cwl_execution.models.Job attribute) co_experimentalist_gate_projects (heliport.core.models.HeliportUser attribute) co_owned_digital_objects (heliport.core.models.HeliportUser attribute) co_owners (heliport.core.models.DigitalObject attribute) co_proposer (heliport.gate_connection.models.GateProject property) collect_into_set() (heliport.gate_connection.proposal_management.user_management.User class method) color_dist() (in module heliport.utils.colors) color_dist_array() (in module heliport.utils.colors) column (heliport.tables.models.TableCell attribute) column_id (heliport.tables.models.TableCell attribute) (heliport.tables.models.TableColumn attribute) column_type (heliport.tables.models.TableColumn attribute) columns (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.models.Table property) (heliport.tables.views.TablesView attribute) columns_reversed (heliport.tables.models.Table property) Command (class in heliport.core.management.commands.import_user_data) (class in heliport.cwl_execution.management.commands.run_periodic_jobs) (class in heliport.gate_connection.management.commands.update_gate_projects) CommandExecutor (class in heliport.core.utils.command_line_execution) CommandResults (class in heliport.core.utils.command_line_execution) config (heliport.cwl_execution.models.ExecutionLog attribute) config_id (heliport.cwl_execution.models.ExecutionLog attribute) config_invalid() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) configure_job_error() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) configure_job_running() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) configure_job_stopped() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) connect() (heliport.core.utils.command_line_execution.CommandExecutor method) (heliport.core.utils.command_line_execution.ShellSSHCommandExecutor method) (heliport.core.utils.command_line_execution.SSHCommandExecutor method) connect_error_message() (heliport.core.utils.command_line_execution.SSHCommandExecutor method) connected (heliport.core.models.LoginInfo property) ConnectedToGateProjectView (class in heliport.gate_connection.views) ConnectToGateProjectView (class in heliport.gate_connection.views) ConstantAttribute (class in heliport.core.attribute_description) CONTACT_PERSON (heliport.core.models.Contribution.ContributionTypes attribute) contents (heliport.tables.models.TableCell attribute) context_id (heliport.core.utils.json_ld.LdContextEntry property) context_object_name (heliport.cwl_execution.views.ArbitraryCWLListView attribute) (heliport.cwl_execution.views.JobListView attribute) (heliport.cwl_execution.views.ToolListView attribute) (heliport.cwl_execution.views.WorkflowCreateView attribute) (heliport.cwl_execution.views.WorkflowListView attribute) (heliport.cwl_execution.views.WorkflowUpdateView attribute) (heliport.gate_connection.views.ConnectToGateProjectView attribute)

Contribution (class in heliport.core.models) Contribution.ContributionTypes (class in heliport.core.models) Contribution.DoesNotExist Contribution.MultipleObjectsReturned contribution_id (heliport.core.models.Contribution attribute) contribution_set (heliport.core.models.DigitalObject attribute) (heliport.core.models.HeliportUser attribute) contribution_to (heliport.core.models.Contribution attribute) contribution_to_id (heliport.core.models.Contribution attribute) ContributionRDFSerializer (class in heliport.core.serializers) contributions (heliport.core.models.DigitalObject property) ContributionSerializer (class in heliport.core.serializers) ContributionSerializer.Meta (class in heliport.core.serializers) ContributionT (class in heliport.core.attribute_description) ContributionT.ContributionDescription (class in heliport.core.attribute_description) ContributionViewSet (class in heliport.core.views) contributor (heliport.core.models.Contribution attribute) contributor_id (heliport.core.models.Contribution attribute) copy_groups() (in module heliport.core.migrations.0008_rebuild_group_model) CoreVocabularyTest (class in heliport.core.tests) create() (heliport.archive.serializers.ArchiveSerializer method) (heliport.core.serializers.DigitalObjectAPISerializer method) (heliport.core.serializers.DigitalObjectListSerializer method) (heliport.data_management_plan.serializers.DataManagementPlanSerializer method) (heliport.documentation.serializers.DocumentationSerializer method) (heliport.publication.serializers.PublicationSerializer method) (heliport.sharelatex.serializers.LatexSerializer method) (heliport.version_control.serializers.VersionControlSerializer method) create_command_executor() (in module heliport.core.utils.command_line_execution) create_copy() (heliport.core.models.DigitalObject method) create_empty_project() (in module heliport.core.utils.queries) create_heading (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute) create_or_update_gate_project() (heliport.gate_connection.models.ProposalQueries static method) (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.GateQueries static method) create_user() (heliport.gate_connection.models.ProposalUserQueries static method) (heliport.gate_connection.proposal_management.user_management.UserQueries static method) created (heliport.core.models.DigitalObject attribute) CreateEmptyProjectView (class in heliport.core.views) CreateProjectView (class in heliport.core.views) creation_date (heliport.tables.models.TableRow attribute) crossref (heliport.core.vocabulary.DATACITE attribute) CRYPTO_KEY (heliport.core.conf.HeliportAppConf attribute) current_key (heliport.core.utils.json_ld.LdContextEntry property) cwl (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) (heliport.cwl_execution.cwl_helpers.cwl_parameter.AutoValue attribute) (heliport.cwl_execution.cwl_helpers.cwl_parameter.BooleanParameterValue property) (heliport.cwl_execution.cwl_helpers.cwl_parameter.ParameterValue property) (heliport.cwl_execution.models.Executable property) (heliport.cwl_execution.models.Job property) cwl_is_public (heliport.cwl_execution.models.Executable attribute) cwl_json (heliport.cwl_execution.models.Executable attribute) (heliport.cwl_execution.models.Job attribute) cwl_split_type() (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) cwl_str (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) cwl_to_rdf() (in module heliport.cwl_execution.cwl_helpers.cwl2rdf) cwl_to_tool_description() (in module heliport.cwl_execution.cwl_helpers.cwl_tool) cwl_to_visualization_data() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) cwl_type (heliport.cwl_execution.models.Executable attribute) CwlExecutionAppConf (class in heliport.cwl_execution.conf) CwlExecutionAppConf.Meta (class in heliport.cwl_execution.conf) CwlExecutionConfig (class in heliport.cwl_execution.apps) CWLExecutorManager (class in heliport.cwl_execution.cwl_helpers.cwl_execution) CwlJob (class in heliport.cwl_execution.cwl_helpers.cwl_job) CwlParameter (class in heliport.cwl_execution.cwl_helpers.cwl_parameter)

D

dashed (heliport.digital_objects.models.VisualizationEdge attribute) data (heliport.core.models.LoginInfo attribute) DATA_COLLECTOR (heliport.core.models.Contribution.ContributionTypes attribute) DATA_CURATOR (heliport.core.models.Contribution.ContributionTypes attribute) data_for_visualization_node() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) data_management_plan_id (heliport.data_management_plan.models.DataManagementPlan attribute) DATA_MANAGER (heliport.core.models.Contribution.ContributionTypes attribute) data_source_by_path() (in module heliport.data_source.views) data_source_filename() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager class method) data_source_id (heliport.data_source.models.DataSource attribute) data_source_path() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager static method) DATACITE (class in heliport.core.vocabulary) datacite_id (heliport.core.utils.IDs.IdentifierScheme attribute) DataCiteJSONRenderer (class in heliport.core.serializers) DataCiteRenderer (class in heliport.core.serializers) DATACITESerializer (class in heliport.core.serializers) DataManagementPlan (class in heliport.data_management_plan.models) datamanagementplan (heliport.core.models.DigitalObject attribute) DataManagementPlan.DoesNotExist DataManagementPlan.MultipleObjectsReturned DataManagementPlanConfig (class in heliport.data_management_plan.apps) DataManagementPlanModule (class in heliport.data_management_plan.interface) DataManagementPlanSerializer (class in heliport.data_management_plan.serializers) DataManagementPlanSerializer.Meta (class in heliport.data_management_plan.serializers) DataManagementPlanTests (class in heliport.data_management_plan.tests) DataManagementPlanUpdateView (class in heliport.data_management_plan.views) DataManagementPlanView (class in heliport.data_management_plan.views) DataManagementPlanViewSet (class in heliport.data_management_plan.views) DataMangementPlan (heliport.core.vocabulary.FABIO attribute) DataSource (class in heliport.data_source.models) datasource (heliport.core.models.DigitalObject attribute) DataSource.DoesNotExist DataSource.MultipleObjectsReturned datasource_has_native_cwl_support() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager static method) datasource_set (heliport.core.models.LoginInfo attribute) (heliport.data_source.models.DataSource attribute) DataSourceConfig (class in heliport.data_source.apps) DataSourceModule (class in heliport.data_source.interface) DataSourceSerializer (class in heliport.data_source.serializers) DataSourceSerializer.Meta (class in heliport.data_source.serializers) DataSourceUpdateView (class in heliport.data_source.views) DataSourceView (class in heliport.data_source.views) DataSourceViewSet (class in heliport.data_source.views) DateT (class in heliport.core.attribute_description) dblp (heliport.core.vocabulary.DATACITE attribute) DecoratorDict (class in heliport.utils.collections) DecoratorIndex (class in heliport.utils.collections) DecoratorList (class in heliport.utils.collections) decrypt() (in module heliport.core.utils.encryption) decrypt_passwords() (in module heliport.core.migrations.0006_auto_20220322_1052) decrypted_key (heliport.core.utils.command_line_execution.SSHCommandExecutor property) default_auto_field (heliport.unicore.apps.UnicoreConfig attribute) DEFAULT_JOB_OPTIONS (heliport.cwl_execution.conf.CwlExecutionAppConf attribute) DEFAULT_JOB_PATH (heliport.cwl_execution.conf.CwlExecutionAppConf attribute) DEFAULT_JOB_SETUP_COMMAND (heliport.cwl_execution.conf.CwlExecutionAppConf attribute) default_str_to_type_dict() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) delete_all_edges() (heliport.digital_objects.models.ObjectGraph method) delete_ssh_key() (in module heliport.core.user_logic.remote_login) DeleteAllTokensView (class in heliport.core.views) deleted (heliport.core.models.DigitalObject attribute) dependencies (heliport.archive.migrations.0001_initial.Migration attribute) (heliport.archive.migrations.0002_remove_archive_archive_number_remove_archive_url.Migration attribute) (heliport.core.migrations.0001_initial.Migration attribute) (heliport.core.migrations.0002_auto_20220224_1552.Migration attribute) (heliport.core.migrations.0003_image.Migration attribute) (heliport.core.migrations.0004_auto_20220314_1014.Migration attribute) (heliport.core.migrations.0005_logininfo_encrypted_password.Migration attribute) (heliport.core.migrations.0006_auto_20220322_1052.Migration attribute) (heliport.core.migrations.0007_remove_logininfo_password.Migration attribute) (heliport.core.migrations.0008_rebuild_group_model.Migration attribute) (heliport.core.migrations.0009_heliportuser_affiliation_contribution.Migration attribute) (heliport.core.migrations.0010_contribution_type.Migration attribute) (heliport.core.migrations.0011_set_digitalobject_role.Migration attribute) (heliport.core.migrations.0012_auto_20220401_1204.Migration attribute) (heliport.core.migrations.0013_timelineconfiguration.Migration attribute) (heliport.core.migrations.0014_tag.Migration attribute) (heliport.core.migrations.0015_digitalobject_last_modified.Migration attribute) (heliport.core.migrations.0016_insert_core_vocabulary.Migration attribute) (heliport.core.migrations.0017_digitalobjectrelation_is_public_and_more.Migration attribute) (heliport.core.migrations.0018_digitalobject_description_is_public_and_more.Migration attribute) (heliport.core.migrations.0019_digitalobject_last_modified_is_public.Migration attribute) (heliport.core.migrations.0020_namedtoken.Migration attribute) (heliport.cwl_execution.migrations.0001_initial.Migration attribute) (heliport.cwl_execution.migrations.0002_executionlog_error_message_executionlog_output_code_and_more.Migration attribute) (heliport.cwl_execution.migrations.0003_executable_cwl_is_public_and_more.Migration attribute) (heliport.data_management_plan.migrations.0001_initial.Migration attribute) (heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link.Migration attribute) (heliport.data_source.migrations.0001_initial.Migration attribute) (heliport.data_source.migrations.0002_datasource_generated_inside.Migration attribute) (heliport.digital_objects.migrations.0001_initial.Migration attribute) (heliport.documentation.migrations.0001_initial.Migration attribute) (heliport.documentation.migrations.0002_remove_documentation_link.Migration attribute) (heliport.gate_connection.migrations.0001_initial.Migration attribute) (heliport.publication.migrations.0001_initial.Migration attribute) (heliport.publication.migrations.0002_remove_publication_url.Migration attribute) (heliport.sharelatex.migrations.0001_initial.Migration attribute) (heliport.sharelatex.migrations.0002_remove_sharelatex_url.Migration attribute) (heliport.tables.migrations.0001_initial.Migration attribute) (heliport.tables.migrations.0002_tablecell_image.Migration attribute) (heliport.tables.migrations.0003_auto_20220321_1736.Migration attribute) (heliport.unicore.migrations.0001_initial.Migration attribute) (heliport.unicore.migrations.0002_unicoreresource_heliport_project.Migration attribute) (heliport.version_control.migrations.0001_initial.Migration attribute) (heliport.version_control.migrations.0002_remove_versioncontrol_link.Migration attribute) deploy_ssh_key() (in module heliport.core.user_logic.remote_login) described_by_parameter (heliport.core.models.Vocabulary attribute) described_by_process (heliport.core.models.Vocabulary attribute) describes_list (heliport.core.attribute_description.InternalValueDescription attribute) (heliport.core.attribute_description.ListT.ListDescription attribute) description (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.attribute_description.BaseAttribute property) DESCRIPTION (heliport.core.conf.HeliportHandlesAppConf attribute) description (heliport.core.models.DigitalObject attribute) (heliport.core.models.Vocabulary attribute) (heliport.core.views.ContributionViewSet attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute) description_is_public (heliport.core.models.DigitalObject attribute) DescriptionType (heliport.core.vocabulary.DATACITE attribute) DeserializationError deserialize() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.ContributionT method) (heliport.core.attribute_description.DateT method) (heliport.core.attribute_description.DigitalObjectT method) (heliport.core.attribute_description.EnumStringT method) (heliport.core.attribute_description.ListT method) (heliport.core.attribute_description.PersonT method) (heliport.core.attribute_description.ProjectT method) (heliport.core.attribute_description.StringT method)

detail (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ContributionViewSet attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute) dia (heliport.core.vocabulary.DATACITE attribute) differentiate_nodes() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) digital_object_attribute_id (heliport.core.models.DigitalObjectAttributes attribute) digital_object_attributes() (in module heliport.core.serializers) digital_object_form_label_and_pk() (in module heliport.core.models) DIGITAL_OBJECT_HOST (heliport.core.conf.HeliportHandlesAppConf attribute) digital_object_id (heliport.core.models.DigitalObject attribute) digital_object_lookup() (heliport.core.models.Project method) digital_object_relation_id (heliport.core.models.DigitalObjectRelation attribute) digital_objects_by_type() (in module heliport.core.utils.queries) DigitalObject (class in heliport.core.models) DigitalObject.DoesNotExist DigitalObject.MultipleObjectsReturned DigitalObject.ObjectPermissions (class in heliport.core.models) digitalobject_ptr (heliport.archive.models.Archive attribute) (heliport.core.models.Image attribute) (heliport.core.models.Project attribute) (heliport.core.models.Tag attribute) (heliport.cwl_execution.models.Executable attribute) (heliport.cwl_execution.models.Job attribute) (heliport.data_management_plan.models.DataManagementPlan attribute) (heliport.data_source.models.DataSource attribute) (heliport.digital_objects.models.ObjectGraph attribute) (heliport.documentation.models.Documentation attribute) (heliport.gate_connection.models.GateProject attribute) (heliport.publication.models.Publication attribute) (heliport.sharelatex.models.ShareLaTeX attribute) (heliport.tables.models.Table attribute) (heliport.version_control.models.VersionControl attribute) digitalobject_ptr_id (heliport.archive.models.Archive attribute) (heliport.core.models.Image attribute) (heliport.core.models.Project attribute) (heliport.core.models.Tag attribute) (heliport.cwl_execution.models.Executable attribute) (heliport.cwl_execution.models.Job attribute) (heliport.data_management_plan.models.DataManagementPlan attribute) (heliport.data_source.models.DataSource attribute) (heliport.digital_objects.models.ObjectGraph attribute) (heliport.documentation.models.Documentation attribute) (heliport.gate_connection.models.GateProject attribute) (heliport.publication.models.Publication attribute) (heliport.sharelatex.models.ShareLaTeX attribute) (heliport.tables.models.Table attribute) (heliport.version_control.models.VersionControl attribute) digitalobject_set (heliport.core.models.HeliportGroup attribute) (heliport.core.models.HeliportUser attribute) (heliport.core.models.Project attribute) DigitalObjectAPI (class in heliport.core.views) DigitalObjectAPISerializer (class in heliport.core.serializers) DigitalObjectAPISerializer.ID_KEY (class in heliport.core.serializers) DigitalObjectAPISerializer.Meta (class in heliport.core.serializers) DigitalObjectAttributes (class in heliport.core.models) DigitalObjectAttributes.DoesNotExist DigitalObjectAttributes.MultipleObjectsReturned DigitalObjectAutocompleteView (class in heliport.core.views) DigitalObjectDATACITESerializer (class in heliport.core.serializers) DigitalObjectDeleteView (class in heliport.digital_objects.views) DigitalObjectListSerializer (class in heliport.core.serializers) DigitalObjectPropertiesView (class in heliport.digital_objects.views) DigitalObjectPropertiesView.AttributeInfo (class in heliport.digital_objects.views) DigitalObjectRDFSerializer (class in heliport.core.serializers) DigitalObjectRelation (class in heliport.core.models) DigitalObjectRelation.DoesNotExist DigitalObjectRelation.MultipleObjectsReturned DigitalObjectRelationSerializer (class in heliport.digital_objects.serializers) DigitalObjectRelationSerializer.Meta (class in heliport.digital_objects.serializers) DigitalObjectRelationViewSet (class in heliport.digital_objects.views) DigitalObjectsConfig (class in heliport.digital_objects.apps) DigitalObjectSerializer (class in heliport.digital_objects.serializers) DigitalObjectSerializer.Meta (class in heliport.digital_objects.serializers) DigitalObjectsModule (class in heliport.digital_objects.interface) DigitalObjectT (class in heliport.core.attribute_description) DigitalObjectTests (class in heliport.digital_objects.tests) DigitalObjectViewSet (class in heliport.digital_objects.views) directory (heliport.core.models.Image attribute) (heliport.cwl_execution.models.UserJobConfig attribute) disable_copy (heliport.gate_connection.models.GateProject attribute) (heliport.tables.models.Table attribute) DisableClientSideCachingMiddleware (class in heliport.core.middleware.never_cache_middleware) discard() (heliport.utils.collections.IndexedSet method) dispatch() (heliport.unicore.mixins.UnicoreServerAuthenticationRequiredMixin method) (heliport.unicore.views.CallbackView method) display_name (heliport.core.models.Group attribute) (heliport.core.models.HeliportUser attribute) DISTRIBUTOR (heliport.core.models.Contribution.ContributionTypes attribute) distributor (heliport.core.vocabulary.PRO attribute) DmpDATACITESerializer (class in heliport.data_management_plan.serializers) dnb (heliport.core.vocabulary.DATACITE attribute) do_request() (heliport.core.tests.HandleServerInteractionTest.HandleServerMock method) (heliport.core.utils.handles.HandleServer static method) DOCU_HEDGEDOC (heliport.documentation.models.Documentation attribute) DOCU_LIMS (heliport.documentation.models.Documentation attribute) DOCU_MEDIA_WIKI (heliport.documentation.models.Documentation attribute) DOCU_OPEN_BIS (heliport.documentation.models.Documentation attribute) DOCU_OTHER (heliport.documentation.models.Documentation attribute) DOCU_SYSTEMS (heliport.documentation.models.Documentation attribute) Documentation (class in heliport.documentation.models) documentation (heliport.core.models.DigitalObject attribute) Documentation.DoesNotExist Documentation.MultipleObjectsReturned documentation_id (heliport.documentation.models.Documentation attribute) DocumentationConfig (class in heliport.documentation.apps) DocumentationDATACITESerializer (class in heliport.documentation.serializers) DocumentationModule (class in heliport.documentation.interface) DocumentationSerializer (class in heliport.documentation.serializers) DocumentationSerializer.Meta (class in heliport.documentation.serializers) DocumentationTests (class in heliport.documentation.tests) DocumentationUpdateView (class in heliport.documentation.views) DocumentationView (class in heliport.documentation.views) DocumentationViewSet (class in heliport.documentation.views) doi (heliport.core.vocabulary.DATACITE attribute) download() (heliport.gate_connection.proposal_management.gate_user_management.GateUser method) (heliport.gate_connection.proposal_management.ldap_user_management.LDAPUser method) (heliport.gate_connection.proposal_management.user_management.User method) download_data() (heliport.core.models.Image method) download_data_with_curl() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) download_projects() (heliport.version_control.views.VersionControlView method) download_proposals() (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.HZDRGateProposalManager method) (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.ProposalManager method) download_url_is_public (heliport.core.models.Image attribute) (heliport.cwl_execution.models.Executable attribute) duration (heliport.cwl_execution.models.ExecutionLog property) duration_str (heliport.cwl_execution.models.ExecutionLog property) dynamic_triples() (heliport.core.serializers.DigitalObjectRDFSerializer static method) DynamicAttribute (class in heliport.core.attribute_description)

E

ean13 (heliport.core.vocabulary.DATACITE attribute) echo_command_separator (heliport.core.utils.command_line_execution.ShellSSHCommandExecutor property) edge_id (heliport.digital_objects.models.VisualizationEdge attribute) edge_label (heliport.digital_objects.models.VisualizationEdge property) edit_fields (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute) edit_tags (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) EDITOR (heliport.core.models.Contribution.ContributionTypes attribute) editor (heliport.core.vocabulary.PRO attribute) eissn (heliport.core.vocabulary.DATACITE attribute) email (heliport.core.models.HeliportUser property) email_is_public (heliport.core.models.HeliportUser attribute) email_sha1_is_public (heliport.core.models.HeliportUser attribute) encrypt() (in module heliport.core.utils.encryption) encrypt_passwords() (in module heliport.core.migrations.0006_auto_20220322_1052) encrypted_password (heliport.core.models.LoginInfo attribute) end (heliport.digital_objects.views.ObjectGraphView.Edge attribute) end_time (heliport.cwl_execution.models.ExecutionLog attribute) EnumAttribute (class in heliport.core.attribute_description) EnumStringT (class in heliport.core.attribute_description) ERROR (heliport.cwl_execution.models.Job.OutputCodes attribute) error_message (heliport.cwl_execution.models.ExecutionLog attribute) evaluated_contents (heliport.tables.models.TableCell attribute) Executable (class in heliport.cwl_execution.models) executable (heliport.core.models.DigitalObject attribute) Executable.CWLTypes (class in heliport.cwl_execution.models) Executable.DoesNotExist Executable.ExecutableTypes (class in heliport.cwl_execution.models) Executable.MultipleObjectsReturned executable_id (heliport.cwl_execution.models.Executable attribute) ExecutableDATACITESerializer (class in heliport.cwl_execution.serializers) ExecutableRawJsonView (class in heliport.cwl_execution.views) ExecutableRawYamlView (class in heliport.cwl_execution.views) ExecutableRDFSerializer (class in heliport.cwl_execution.serializers) ExecutableSerializer (class in heliport.cwl_execution.serializers)

ExecutableSerializer.Meta (class in heliport.cwl_execution.serializers) ExecutableViewSet (class in heliport.cwl_execution.views) execute() (heliport.core.utils.command_line_execution.CommandExecutor method) (heliport.core.utils.command_line_execution.ShellSSHCommandExecutor method) (heliport.core.utils.command_line_execution.SSHCommandExecutor method) (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) (heliport.cwl_execution.views.UserJobConfigViewSet method) (heliport.gate_connection.proposal_management.use_cases.UpdateProposalDatabaseUseCase method) (heliport.utils.table_description.TableAction method) (heliport.utils.table_description.TableDescription method) execution_directory (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) execution_id (heliport.cwl_execution.models.ExecutionLog attribute) execution_log_id (heliport.cwl_execution.models.ExecutionLog attribute) ExecutionLog (class in heliport.cwl_execution.models) ExecutionLog.DoesNotExist ExecutionLog.MultipleObjectsReturned executionlog_set (heliport.core.models.HeliportUser attribute) (heliport.cwl_execution.models.UserJobConfig attribute) executor (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager attribute) exists (heliport.core.attribute_description.BoundAttribute property) exists_on() (heliport.core.attribute_description.BaseAttribute method) experimentalist_gate_projects (heliport.core.models.HeliportUser attribute) experimentalists (heliport.gate_connection.models.GateProject attribute) extend() (heliport.core.utils.queries.ListOfQuerySets method) extend_index() (heliport.digital_objects.views.ObjectGraphView method) extract_action() (heliport.core.custom_views.HeliportObjectListView method) extract_boolean_param() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) extract_data_source_from_cwl_parameter() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager static method) extract_digital_object() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) extract_form_fields() (heliport.core.custom_views.HeliportObjectListView method) extract_http_content() (heliport.core.utils.command_line_execution.CommandResults method) extract_http_json() (heliport.core.utils.command_line_execution.CommandResults method) extract_inputs_from_tags() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) extract_properties() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) extract_pure_executable_cwl_and_token_inputs() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) extract_pure_job_cwl_and_data_sources() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) extract_request_data() (heliport.tables.views.TableUpdateRowView static method) extract_users() (heliport.gate_connection.proposal_management.gate_user_management.GateUser static method) (heliport.gate_connection.proposal_management.ldap_user_management.LDAPUser class method) (heliport.gate_connection.proposal_management.user_management.User static method)

F

FABIO (class in heliport.core.vocabulary) fail() (heliport.core.models.Image method) FAILED (heliport.core.models.Image.ImageStates attribute) FaviconView (class in heliport.core.views) fetch_digital_objects_relations() (heliport.digital_objects.views.ObjectsView static method) fetch_user() (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) fields (heliport.archive.serializers.ArchiveSerializer.Meta attribute) (heliport.core.serializers.ContributionSerializer.Meta attribute) (heliport.core.serializers.DigitalObjectAPISerializer.Meta attribute) (heliport.core.serializers.GroupSerializer.Meta attribute) (heliport.core.serializers.ProjectSerializer.Meta attribute) (heliport.core.serializers.TokenSerializer.Meta attribute) (heliport.core.serializers.UserSerializer.Meta attribute) (heliport.core.views.LoginInfoUpdateView attribute) (heliport.core.views.LoginInfoView attribute) (heliport.core.views.ProjectUpdateView attribute) (heliport.cwl_execution.serializers.ExecutableSerializer.Meta attribute) (heliport.cwl_execution.serializers.JobSerializer.Meta attribute) (heliport.cwl_execution.serializers.UserJobConfigSerializer.Meta attribute) (heliport.cwl_execution.views.ArbitraryCWLUpdateView attribute) (heliport.data_management_plan.serializers.DataManagementPlanSerializer.Meta attribute) (heliport.data_management_plan.views.DataManagementPlanUpdateView attribute) (heliport.data_management_plan.views.DataManagementPlanView attribute) (heliport.data_source.serializers.DataSourceSerializer.Meta attribute) (heliport.data_source.views.DataSourceUpdateView attribute) (heliport.data_source.views.DataSourceView attribute) (heliport.digital_objects.serializers.DigitalObjectRelationSerializer.Meta attribute) (heliport.digital_objects.serializers.DigitalObjectSerializer.Meta attribute) (heliport.documentation.serializers.DocumentationSerializer.Meta attribute) (heliport.documentation.views.DocumentationUpdateView attribute) (heliport.documentation.views.DocumentationView attribute) (heliport.gate_connection.serializers.GateProjectSerializer.Meta attribute) (heliport.gate_connection.serializers.GateUserSerializer.Meta attribute) (heliport.publication.serializers.PublicationSerializer.Meta attribute) (heliport.sharelatex.serializers.LatexSerializer.Meta attribute) (heliport.version_control.serializers.VersionControlSerializer.Meta attribute) (heliport.version_control.views.VersionControlUpdateView attribute) (heliport.version_control.views.VersionControlView attribute) file() (heliport.core.utils.command_line_execution.CommandExecutor method) (heliport.core.utils.command_line_execution.SSHCommandExecutor method) file_or_directory() (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) filename (heliport.core.models.Image attribute) (heliport.core.models.Vocabulary attribute) fileName (heliport.core.vocabulary.SemanticDesktop.NFO attribute) filter() (heliport.core.utils.queries.ListOfQuerySets method) filter_backends (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute)

filter_by() (heliport.utils.collections.IndexedSet method) filter_executables() (in module heliport.cwl_execution.cwl_helpers.cwl_generation) filter_horizontal (heliport.core.admin.ProjectAdmin attribute) filter_nodes() (heliport.core.vocabulary_descriptor.TripleDescription static method) filter_object_has_not_properties() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) filter_prefixes() (heliport.core.serializers.JsonLdRenderer static method) filter_subject_has_not_properties() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) filterset_fields (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute) finalize_response() (heliport.core.views.DigitalObjectAPI method) find_id_usages() (heliport.core.serializers.JsonLdRenderer class method) find_identifier_scheme() (in module heliport.core.utils.IDs) form_template_name (heliport.core.attribute_description.AttributeType attribute) (heliport.core.attribute_description.ContributionT attribute) (heliport.core.attribute_description.DigitalObjectT attribute) form_valid() (heliport.core.views.LoginInfoUpdateView method) (heliport.core.views.LoginInfoView method) (heliport.data_management_plan.views.DataManagementPlanUpdateView method) (heliport.data_management_plan.views.DataManagementPlanView method) (heliport.data_source.views.DataSourceUpdateView method) (heliport.data_source.views.DataSourceView method) (heliport.documentation.views.DocumentationUpdateView method) (heliport.documentation.views.DocumentationView method) (heliport.version_control.views.VersionControlUpdateView method) (heliport.version_control.views.VersionControlView method) format_key() (heliport.core.utils.json_ld.LdContextEntry method) format_size() (heliport.data_source.views.SSHDataSourceOpenView static method) format_time() (heliport.data_source.views.SSHDataSourceOpenView static method) FormColumn (class in heliport.utils.form_description) FormDescription (class in heliport.utils.form_description) FormItem (class in heliport.utils.form_description) FromDB (class in heliport.core.models) full_url() (heliport.core.models.DigitalObject method) FunctionResultAttribute (class in heliport.core.attribute_description) FunderIdentifier (heliport.core.vocabulary.DATACITE attribute) FunderIdentifierScheme (heliport.core.vocabulary.DATACITE attribute) fundref (heliport.core.vocabulary.DATACITE attribute)

G

gate_id (heliport.gate_connection.models.GateProject attribute) (heliport.gate_connection.models.GateUser attribute) gate_user_id (heliport.gate_connection.models.GateUser attribute) GateConnectionAppConf (class in heliport.gate_connection.conf) GateConnectionAppConf.Meta (class in heliport.gate_connection.conf) GateConnectionConfig (class in heliport.gate_connection.apps) GATEConnectionModule (class in heliport.gate_connection.interface) GateProject (class in heliport.gate_connection.models) (class in heliport.gate_connection.proposal_management.hzdr_gate_proposal_management) gateproject (heliport.core.models.DigitalObject attribute) GateProject.DoesNotExist GateProject.MultipleObjectsReturned GateProjectSerializer (class in heliport.gate_connection.serializers) GateProjectSerializer.Meta (class in heliport.gate_connection.serializers) GateProjectViewSet (class in heliport.gate_connection.views) GateQueries (class in heliport.gate_connection.proposal_management.hzdr_gate_proposal_management) GateUser (class in heliport.gate_connection.models) (class in heliport.gate_connection.proposal_management.gate_user_management) gateuser (heliport.core.models.HeliportUser attribute) GateUser.DoesNotExist GateUser.MultipleObjectsReturned GateUserSerializer (class in heliport.gate_connection.serializers) GateUserSerializer.Meta (class in heliport.gate_connection.serializers) GateUserViewSet (class in heliport.gate_connection.views) generate_cwl() (heliport.cwl_execution.tests.WorkflowTests static method) generate_cwl_filename() (in module heliport.cwl_execution.cwl_helpers.cwl_generation) generate_cwl_nonempty_id() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) generate_edges() (heliport.digital_objects.views.ObjectGraphView method) generate_graph() (heliport.digital_objects.views.ObjectGraphView method) (in module heliport.core.app_interaction) generate_handle_json_data_url() (in module heliport.core.utils.handles) generate_items() (heliport.utils.form_description.FormDescription method) generate_object_id() (in module heliport.core.utils.IDs) generate_parameter_value() (heliport.cwl_execution.cwl_helpers.cwl_parameter.CwlParameter method) generate_port_data() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) generate_project_id() (in module heliport.core.utils.IDs) generate_rows() (heliport.utils.table_description.TableDescription method) generated_inside (heliport.data_source.models.DataSource attribute) generated_inside_id (heliport.data_source.models.DataSource attribute) generated_persistent_id (heliport.core.models.DigitalObject attribute) gepris (heliport.core.vocabulary.DATACITE attribute) get() (heliport.core.custom_views.HeliportObjectListView method) (heliport.core.utils.handles.HandleServer method) (heliport.core.views.CreateEmptyProjectView method) (heliport.core.views.DigitalObjectAutocompleteView method) (heliport.core.views.FaviconView method) (heliport.core.views.ImageView method) (heliport.core.views.IndexView method) (heliport.core.views.LandingPageView method) (heliport.core.views.LogoutView method) (heliport.core.views.MaintenanceMessageView method) (heliport.core.views.PublicLandingPageView method) (heliport.core.views.RegisterView method) (heliport.core.views.RemoteServerLogoutView method) (heliport.core.views.TagAutocompleteView method) (heliport.core.views.TagJsonView method) (heliport.cwl_execution.views.ExecutableRawJsonView method) (heliport.cwl_execution.views.ExecutableRawYamlView method) (heliport.cwl_execution.views.JobDebugView method) (heliport.cwl_execution.views.JobOutputView method) (heliport.cwl_execution.views.JobProfilingJsonView method) (heliport.cwl_execution.views.JobRawYamlView method) (heliport.cwl_execution.views.JobStartView method) (heliport.cwl_execution.views.JobStopView method) (heliport.cwl_execution.views.RunningJobsView method) (heliport.cwl_execution.views.ToolJsonDescriptionView method) (heliport.cwl_execution.views.VisualizationDataView method) (heliport.data_source.views.SSHDataSourceOpenView method) (heliport.digital_objects.views.DigitalObjectPropertiesView method) (heliport.gate_connection.views.ConnectedToGateProjectView method) (heliport.gate_connection.views.ProjectCreateView method) (heliport.tables.views.TableDataView method) (heliport.unicore.views.JobActionView method) (heliport.unicore.views.TestJobView method) get_add_text() (heliport.utils.form_description.FormDescription method) get_all_attributes() (in module heliport.core.serializers) get_all_attributes_bound() (in module heliport.core.serializers) get_all_forward_relations() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) get_all_reverse_relations() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) get_all_tags() (heliport.core.views.TagJsonView static method) get_any_or_none() (heliport.utils.collections.IndexedSet method) get_api_root() (in module heliport.archive.interface) (in module heliport.cwl_execution.interface) (in module heliport.data_management_plan.interface) (in module heliport.data_source.interface) (in module heliport.digital_objects.interface) (in module heliport.documentation.interface) (in module heliport.gate_connection.interface) (in module heliport.publication.interface) (in module heliport.sharelatex.interface) (in module heliport.version_control.interface) get_api_roots() (in module heliport.core.app_interaction) get_attribute() (heliport.core.serializers.MetadataRestField method) (heliport.core.serializers.TemplateField method) get_attribute_type() (in module heliport.core.attribute_description) get_attributes_as() (in module heliport.core.serializers) get_attributes_by_category() (in module heliport.core.serializers) get_authentication_backend_id() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) get_bound_attributes_as() (in module heliport.core.serializers) get_by() (heliport.utils.collections.IndexedSet method) get_column_type_display() (heliport.tables.models.TableColumn method) get_context_data() (heliport.archive.views.SearchView method) (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.ListT method) (heliport.core.custom_views.HeliportObjectListView method) (heliport.core.custom_views.HeliportObjectMixin method) (heliport.core.custom_views.HeliportProjectMixin method) (heliport.core.views.CreateProjectView method) (heliport.core.views.ImagesView method) (heliport.core.views.ImportFromProjectView method) (heliport.core.views.LandingPageView method) (heliport.core.views.LoginInfoUpdateView method) (heliport.core.views.LoginInfoView method) (heliport.core.views.LoginView method) (heliport.core.views.ProjectGraphView method) (heliport.core.views.ProjectListView method) (heliport.core.views.ProjectTimelineView method) (heliport.core.views.ProjectUpdateView method) (heliport.core.views.ProjectView method) (heliport.core.views.PublicLandingPageView method) (heliport.core.views.RemoteServerLoginView method) (heliport.core.views.SearchBaseView method) (heliport.core.views.SearchView method) (heliport.core.views.SubprojectsView method) (heliport.core.views.TakePictureView method) (heliport.core.views.UserSettingsView method) (heliport.cwl_execution.views.ArbitraryCWLListView method) (heliport.cwl_execution.views.ArbitraryCWLUpdateView method) (heliport.cwl_execution.views.JobCreateView method) (heliport.cwl_execution.views.JobDetailView method) (heliport.cwl_execution.views.JobListView method) (heliport.cwl_execution.views.JobParameterValueView method) (heliport.cwl_execution.views.PublicationWorkflowCreateView method) (heliport.cwl_execution.views.SearchView method) (heliport.cwl_execution.views.ToolUpdateView method) (heliport.cwl_execution.views.WorkflowCreateView method) (heliport.cwl_execution.views.WorkflowListView method) (heliport.cwl_execution.views.WorkflowUpdateView method) (heliport.data_management_plan.views.DataManagementPlanUpdateView method) (heliport.data_management_plan.views.DataManagementPlanView method) (heliport.data_management_plan.views.SearchView method) (heliport.data_source.views.DataSourceUpdateView method) (heliport.data_source.views.DataSourceView method) (heliport.data_source.views.SearchView method) (heliport.digital_objects.views.ObjectGraphView method) (heliport.digital_objects.views.ObjectsView method) (heliport.digital_objects.views.SearchView method) (heliport.documentation.views.DocumentationUpdateView method) (heliport.documentation.views.DocumentationView method) (heliport.documentation.views.SearchView method) (heliport.gate_connection.views.ConnectedToGateProjectView method) (heliport.gate_connection.views.ConnectToGateProjectView method) (heliport.gate_connection.views.SearchView method) (heliport.publication.views.SearchView method) (heliport.sharelatex.views.SearchView method) (heliport.tables.views.TableEditView method) (heliport.unicore.mixins.UnicoreMixin method) (heliport.unicore.views.Overview method) (heliport.unicore.views.ProjectJobsView method) (heliport.version_control.views.SearchView method) (heliport.version_control.views.VersionControlUpdateView method) (heliport.version_control.views.VersionControlView method) get_context_dict() (heliport.core.utils.json_ld.LdContext method) get_create_heading() (heliport.core.custom_views.HeliportObjectListView method) get_create_instance() (heliport.core.custom_views.HeliportObjectListView method) get_custom_url() (heliport.core.models.Image method) (heliport.core.views.LandingPageView static method) get_custom_view_url() (heliport.core.models.Project method) get_cwl_type_display() (heliport.cwl_execution.models.Executable method) get_db_user_from() (heliport.gate_connection.proposal_management.gate_user_management.GateUser method) (heliport.gate_connection.proposal_management.ldap_user_management.LDAPUser method) (heliport.gate_connection.proposal_management.user_management.User method) get_default_tag() (heliport.cwl_execution.views.JobCreateView method) get_digital_object_save() (in module heliport.digital_objects.views) get_display_name() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method)

get_dynamic_attributes() (in module heliport.core.serializers) get_edge_sources() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) get_form() (heliport.core.custom_views.HeliportObjectListView method) get_form_context_data() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.ContributionT method) (heliport.core.attribute_description.DateT method) (heliport.core.attribute_description.DigitalObjectT method) (heliport.core.attribute_description.ProjectT method) get_group() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) get_handle_from_response() (in module heliport.core.utils.handles) get_handle_url() (in module heliport.core.utils.handles) get_heliport_apps() (in module heliport.core.app_interaction) get_id() (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.DynamicAttribute method) get_inputs_dict() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager static method) get_is_public() (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.DynamicAttribute method) get_key_values() (in module heliport.core.utils.handles) get_label() (heliport.digital_objects.models.PropertyPath method) get_label_index() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) get_module_index() (in module heliport.core.app_interaction) get_next_by_created() (heliport.core.models.DigitalObject method) get_next_by_creation_date() (heliport.tables.models.TableRow method) get_next_by_last_modified() (heliport.core.models.DigitalObject method) get_next_by_last_update() (heliport.tables.models.TableCell method) get_next_by_last_use_date() (heliport.core.models.Tag method) get_next_by_start_time() (heliport.cwl_execution.models.ExecutionLog method) get_object() (heliport.core.custom_views.HeliportObjectListView method) get_or_create_from_label() (in module heliport.core.utils.queries) get_or_create_with_relation() (in module heliport.core.models) get_or_generate_predicate_obj() (heliport.core.serializers.MetadataRestField method) get_output_code_display() (heliport.cwl_execution.models.ExecutionLog method) (heliport.cwl_execution.models.Job method) get_paged_data() (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.HZDRGateProposalManager method) get_parent_channel() (heliport.core.utils.command_line_execution.SSHCommandExecutor method) get_permission_display() (heliport.core.models.DigitalObject method) get_post_response_data() (heliport.core.views.LoginNamedTokenView method) get_previous_by_created() (heliport.core.models.DigitalObject method) get_previous_by_creation_date() (heliport.tables.models.TableRow method) get_previous_by_last_modified() (heliport.core.models.DigitalObject method) get_previous_by_last_update() (heliport.tables.models.TableCell method) get_previous_by_last_use_date() (heliport.core.models.Tag method) get_previous_by_start_time() (heliport.cwl_execution.models.ExecutionLog method) get_project_create_urls() (in module heliport.core.app_interaction) (in module heliport.gate_connection.interface) get_project_list() (in module heliport.core.views) get_queryset() (heliport.archive.views.ArchiveViewSet method) (heliport.core.views.ContributionViewSet method) (heliport.core.views.ProjectListView method) (heliport.core.views.ProjectViewSet method) (heliport.core.views.TokenViewSet method) (heliport.cwl_execution.views.ArbitraryCWLListView method) (heliport.cwl_execution.views.ExecutableViewSet method) (heliport.cwl_execution.views.JobListView method) (heliport.cwl_execution.views.JobViewSet method) (heliport.cwl_execution.views.ToolListView method) (heliport.cwl_execution.views.UserJobConfigViewSet method) (heliport.cwl_execution.views.WorkflowListView method) (heliport.data_management_plan.views.DataManagementPlanViewSet method) (heliport.data_source.views.DataSourceViewSet method) (heliport.digital_objects.views.DigitalObjectRelationViewSet method) (heliport.digital_objects.views.DigitalObjectViewSet method) (heliport.documentation.views.DocumentationViewSet method) (heliport.gate_connection.views.ConnectToGateProjectView method) (heliport.gate_connection.views.GateProjectViewSet method) (heliport.gate_connection.views.GateUserViewSet method) (heliport.publication.views.PublicationViewSet method) (heliport.sharelatex.views.LatexViewSet method) (heliport.version_control.views.VersionControlViewSet method) get_redirect_url() (heliport.core.views.LandingPageByPersistentIDView method) get_relations() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) get_search_url() (in module heliport.archive.interface) (in module heliport.core.interface) (in module heliport.cwl_execution.interface) (in module heliport.data_management_plan.interface) (in module heliport.data_source.interface) (in module heliport.digital_objects.interface) (in module heliport.documentation.interface) (in module heliport.gate_connection.interface) (in module heliport.publication.interface) (in module heliport.sharelatex.interface) (in module heliport.version_control.interface) get_search_urls() (in module heliport.core.app_interaction) get_special_object() (in module heliport.core.models) get_static_attributes() (in module heliport.core.serializers) get_status_display() (heliport.core.models.Image method) (heliport.cwl_execution.models.Job method) get_success_url() (heliport.core.views.LoginInfoUpdateView method) (heliport.core.views.LoginInfoView method) (heliport.core.views.ProjectUpdateView method) (heliport.data_management_plan.views.DataManagementPlanUpdateView method) (heliport.data_management_plan.views.DataManagementPlanView method) (heliport.data_source.views.DataSourceUpdateView method) (heliport.data_source.views.DataSourceView method) (heliport.documentation.views.DocumentationUpdateView method) (heliport.documentation.views.DocumentationView method) (heliport.version_control.views.VersionControlUpdateView method) (heliport.version_control.views.VersionControlView method) get_system_display() (heliport.documentation.models.Documentation method) get_table() (heliport.core.custom_views.HeliportObjectListView method) get_tag_list() (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob method) get_to_connect_list() (heliport.core.models.LoginInfo method) get_token_ttl() (heliport.core.views.LoginNamedTokenView method) get_type_display() (heliport.core.models.Contribution method) (heliport.core.models.LoginInfo method) (heliport.cwl_execution.models.Executable method) get_unconnected_parents() (heliport.core.models.LoginInfo method) get_unique_renderers() (in module heliport.core.serializers) get_update_heading() (heliport.core.custom_views.HeliportObjectListView method) get_update_instance() (heliport.core.custom_views.HeliportObjectListView method) get_url() (heliport.archive.interface.ArchiveModule method) (heliport.core.app_interaction.Module method) (heliport.core.interface.Images method) (heliport.core.interface.ProjectConfigurationModule method) (heliport.core.interface.SubProjects method) (heliport.core.interface.Tags method) (heliport.core.interface.Timeline method) (heliport.cwl_execution.interface.ArbitraryCWLModule method) (heliport.cwl_execution.interface.JobModule method) (heliport.cwl_execution.interface.ToolModule method) (heliport.cwl_execution.interface.WorkflowModule method) (heliport.data_management_plan.interface.DataManagementPlanModule method) (heliport.data_source.interface.DataSourceModule method) (heliport.digital_objects.interface.ArchiveModule method) (heliport.digital_objects.interface.DigitalObjectsModule method) (heliport.documentation.interface.DocumentationModule method) (heliport.gate_connection.interface.GATEConnectionModule method) (heliport.publication.interface.PublicationModule method) (heliport.sharelatex.interface.ShareLaTeXModule method) (heliport.tables.interface.Tables method) (heliport.unicore.interface.Unicore method) (heliport.unicore.interface.UnicoreProjectJobs method) (heliport.version_control.interface.VersionControlModule method) get_user() (heliport.cwl_execution.models.ExecutionLog method) get_user_by_gate_id() (heliport.gate_connection.models.ProposalUserQueries static method) (heliport.gate_connection.proposal_management.user_management.UserQueries static method) get_user_by_id() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) get_user_by_ldap_id() (heliport.gate_connection.models.ProposalUserQueries static method) (heliport.gate_connection.proposal_management.user_management.UserQueries static method) get_user_by_ldap_id_check_gate_duplication() (heliport.gate_connection.models.ProposalUserQueries static method) (heliport.gate_connection.proposal_management.user_management.UserQueries static method) get_users_autocomplete() (in module heliport.core.views) get_users_by_group() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) get_value() (heliport.core.attribute_description.ContributionT.ContributionDescription method) (heliport.core.attribute_description.InternalValueDescription method) (heliport.core.attribute_description.ListT.ListDescription method) (heliport.core.serializers.MetadataRestField method) (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob method) getattr() (heliport.core.attribute_description.Attribute method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.ConstantAttribute method) (heliport.core.attribute_description.DynamicAttribute method) (heliport.core.attribute_description.EnumAttribute method) (heliport.core.attribute_description.FunctionResultAttribute method) (heliport.core.attribute_description.ManyAttribute method) (heliport.core.serializers.ImageUrlAttribute method) getattr_path() (heliport.core.tests.APITest static method) github (heliport.core.vocabulary.DATACITE attribute) gnd (heliport.core.vocabulary.DATACITE attribute) Group (class in heliport.core.models) group (heliport.core.models.Project attribute) Group.DoesNotExist Group.MultipleObjectsReturned group_by_property() (heliport.digital_objects.views.DigitalObjectPropertiesView class method) group_id (heliport.core.models.Group attribute) (heliport.core.models.HeliportGroup attribute) (heliport.core.models.Project attribute) group_name (heliport.core.models.HeliportGroup attribute) GROUP_NAME_PREFIX (heliport.core.conf.HeliportAppConf attribute) GroupSerializer (class in heliport.core.serializers) GroupSerializer.Meta (class in heliport.core.serializers) GroupViewSet (class in heliport.core.views)

H

handle (heliport.core.vocabulary.DATACITE attribute) handle() (heliport.core.management.commands.import_user_data.Command method) (heliport.cwl_execution.management.commands.run_periodic_jobs.Command method) (heliport.gate_connection.management.commands.update_gate_projects.Command method) handle_action() (heliport.core.custom_views.HeliportObjectListView method) handle_create() (heliport.core.custom_views.HeliportObjectListView method) handle_error() (heliport.core.custom_views.HeliportObjectListView method) handle_server_request() (heliport.core.utils.handles.HandleServer method) handle_update() (heliport.core.custom_views.HeliportObjectListView method) handles_list (heliport.core.attribute_description.BaseAttribute property) HandleServer (class in heliport.core.utils.handles) HandleServerInteractionTest (class in heliport.core.tests) HandleServerInteractionTest.HandleServerMock (class in heliport.core.tests) HandleServerInteractionTest.ResponseObj (class in heliport.core.tests) has_actions (heliport.utils.table_description.TableDescription property) (heliport.utils.table_description.TableRow property) has_identifier (heliport.core.models.Vocabulary attribute) has_input (heliport.core.models.Vocabulary attribute) has_object_permission() (heliport.core.permissions.HeliportObjectPermission method) (heliport.core.permissions.HeliportProjectPermission method) (heliport.core.permissions.StaffOrReadOnly method) has_parameters (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) has_part (heliport.core.models.Vocabulary attribute) has_permission_for() (in module heliport.core.permissions) has_read_permission() (in module heliport.core.permissions) has_required_elements() (heliport.utils.form_description.FormDescription method) has_tag (heliport.core.models.Vocabulary attribute) has_write_permission() (in module heliport.core.permissions) hasCreatorList (heliport.core.vocabulary.DATACITE attribute) hasDescription (heliport.core.vocabulary.DATACITE attribute) hasDescriptionType (heliport.core.vocabulary.DATACITE attribute) hasGeneralResourceType (heliport.core.vocabulary.DATACITE attribute) HashableDictWrapper (class in heliport.utils.collections) hasIdentifier (heliport.core.vocabulary.DATACITE attribute) hdl_net_landing_page (heliport.core.models.DigitalObject property) heliport module HELIPORT (heliport.core.models.Vocabulary attribute) heliport.archive module heliport.archive.admin module heliport.archive.apps module heliport.archive.interface module heliport.archive.migrations module heliport.archive.migrations.0001_initial module heliport.archive.migrations.0002_remove_archive_archive_number_remove_archive_url module heliport.archive.models module heliport.archive.serializers module heliport.archive.tests module heliport.archive.urls module heliport.archive.views module heliport.core module heliport.core.admin module heliport.core.app_interaction module heliport.core.apps module heliport.core.attribute_description module heliport.core.conf module heliport.core.custom_views module heliport.core.interface module heliport.core.management module heliport.core.management.commands module heliport.core.management.commands.import_user_data module heliport.core.middleware module heliport.core.middleware.never_cache_middleware module heliport.core.migrations module heliport.core.migrations.0001_initial module heliport.core.migrations.0002_auto_20220224_1552 module heliport.core.migrations.0003_image module heliport.core.migrations.0004_auto_20220314_1014 module heliport.core.migrations.0005_logininfo_encrypted_password module heliport.core.migrations.0006_auto_20220322_1052 module heliport.core.migrations.0007_remove_logininfo_password module heliport.core.migrations.0008_rebuild_group_model module heliport.core.migrations.0009_heliportuser_affiliation_contribution module heliport.core.migrations.0010_contribution_type module heliport.core.migrations.0011_set_digitalobject_role module heliport.core.migrations.0012_auto_20220401_1204 module heliport.core.migrations.0013_timelineconfiguration module heliport.core.migrations.0014_tag module heliport.core.migrations.0015_digitalobject_last_modified module heliport.core.migrations.0016_insert_core_vocabulary module heliport.core.migrations.0017_digitalobjectrelation_is_public_and_more module heliport.core.migrations.0018_digitalobject_description_is_public_and_more module heliport.core.migrations.0019_digitalobject_last_modified_is_public module heliport.core.migrations.0020_namedtoken module heliport.core.models module heliport.core.permissions module heliport.core.serializers module heliport.core.tasks module heliport.core.templatetags module heliport.core.templatetags.heliport module heliport.core.tests module heliport.core.urls module heliport.core.user_logic module heliport.core.user_logic.remote_login module heliport.core.user_logic.user_information module heliport.core.user_logic.user_information_managers module heliport.core.user_logic.user_information_managers.manager_ldap module heliport.core.user_logic.user_information_managers.managers module heliport.core.utils module heliport.core.utils.command_line_execution module heliport.core.utils.encryption module heliport.core.utils.handles module heliport.core.utils.IDs module heliport.core.utils.json_ld module heliport.core.utils.normalization module heliport.core.utils.queries module heliport.core.utils.version module heliport.core.views module heliport.core.vocabulary module heliport.core.vocabulary_core module heliport.core.vocabulary_descriptor module heliport.cwl_execution module heliport.cwl_execution.admin module heliport.cwl_execution.apps module heliport.cwl_execution.conf module heliport.cwl_execution.cwl_helpers module heliport.cwl_execution.cwl_helpers.cwl2rdf module heliport.cwl_execution.cwl_helpers.cwl_execution module heliport.cwl_execution.cwl_helpers.cwl_generation module heliport.cwl_execution.cwl_helpers.cwl_job module heliport.cwl_execution.cwl_helpers.cwl_parameter module heliport.cwl_execution.cwl_helpers.cwl_tool module heliport.cwl_execution.cwl_helpers.cwl_workflow module heliport.cwl_execution.interface module heliport.cwl_execution.management module heliport.cwl_execution.management.commands module heliport.cwl_execution.management.commands.run_periodic_jobs module heliport.cwl_execution.migrations module heliport.cwl_execution.migrations.0001_initial module heliport.cwl_execution.migrations.0002_executionlog_error_message_executionlog_output_code_and_more module heliport.cwl_execution.migrations.0003_executable_cwl_is_public_and_more module heliport.cwl_execution.models module heliport.cwl_execution.serializers module heliport.cwl_execution.tasks module heliport.cwl_execution.tests module heliport.cwl_execution.urls module heliport.cwl_execution.views module heliport.data_management_plan module heliport.data_management_plan.admin module heliport.data_management_plan.apps module heliport.data_management_plan.interface module heliport.data_management_plan.migrations module heliport.data_management_plan.migrations.0001_initial module heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link module heliport.data_management_plan.models module heliport.data_management_plan.serializers module heliport.data_management_plan.tests module heliport.data_management_plan.urls module heliport.data_management_plan.views module heliport.data_source module heliport.data_source.admin module heliport.data_source.apps module heliport.data_source.interface module heliport.data_source.migrations module heliport.data_source.migrations.0001_initial module heliport.data_source.migrations.0002_datasource_generated_inside module heliport.data_source.models module heliport.data_source.serializers module heliport.data_source.tests module heliport.data_source.urls module

heliport.data_source.views module heliport.digital_objects module heliport.digital_objects.admin module heliport.digital_objects.apps module heliport.digital_objects.interface module heliport.digital_objects.migrations module heliport.digital_objects.migrations.0001_initial module heliport.digital_objects.models module heliport.digital_objects.serializers module heliport.digital_objects.tests module heliport.digital_objects.urls module heliport.digital_objects.views module heliport.documentation module heliport.documentation.admin module heliport.documentation.apps module heliport.documentation.interface module heliport.documentation.migrations module heliport.documentation.migrations.0001_initial module heliport.documentation.migrations.0002_remove_documentation_link module heliport.documentation.models module heliport.documentation.serializers module heliport.documentation.tests module heliport.documentation.urls module heliport.documentation.views module heliport.gate_connection module heliport.gate_connection.admin module heliport.gate_connection.apps module heliport.gate_connection.conf module heliport.gate_connection.interface module heliport.gate_connection.management module heliport.gate_connection.management.commands module heliport.gate_connection.management.commands.update_gate_projects module heliport.gate_connection.migrations module heliport.gate_connection.migrations.0001_initial module heliport.gate_connection.models module heliport.gate_connection.proposal_management module heliport.gate_connection.proposal_management.gate_user_management module heliport.gate_connection.proposal_management.hzdr_gate_proposal_management module heliport.gate_connection.proposal_management.ldap_user_management module heliport.gate_connection.proposal_management.use_cases module heliport.gate_connection.proposal_management.user_management module heliport.gate_connection.serializers module heliport.gate_connection.tasks module heliport.gate_connection.tests module heliport.gate_connection.urls module heliport.gate_connection.views module heliport.publication module heliport.publication.admin module heliport.publication.apps module heliport.publication.interface module heliport.publication.migrations module heliport.publication.migrations.0001_initial module heliport.publication.migrations.0002_remove_publication_url module heliport.publication.models module heliport.publication.serializers module heliport.publication.tests module heliport.publication.urls module heliport.publication.views module heliport.sharelatex module heliport.sharelatex.admin module heliport.sharelatex.apps module heliport.sharelatex.interface module heliport.sharelatex.migrations module heliport.sharelatex.migrations.0001_initial module heliport.sharelatex.migrations.0002_remove_sharelatex_url module heliport.sharelatex.models module heliport.sharelatex.serializers module heliport.sharelatex.tests module heliport.sharelatex.urls module heliport.sharelatex.views module heliport.tables module heliport.tables.admin module heliport.tables.apps module heliport.tables.interface module heliport.tables.migrations module heliport.tables.migrations.0001_initial module heliport.tables.migrations.0002_tablecell_image module heliport.tables.migrations.0003_auto_20220321_1736 module heliport.tables.models module heliport.tables.tests module heliport.tables.urls module heliport.tables.views module heliport.unicore module heliport.unicore.admin module heliport.unicore.apps module heliport.unicore.conf module heliport.unicore.decorators module heliport.unicore.interface module heliport.unicore.migrations module heliport.unicore.migrations.0001_initial module heliport.unicore.migrations.0002_unicoreresource_heliport_project module heliport.unicore.mixins module heliport.unicore.models module heliport.unicore.tests module heliport.unicore.urls module heliport.unicore.views module heliport.utils module heliport.utils.collections module heliport.utils.colors module heliport.utils.form_description module heliport.utils.string_tools module heliport.utils.table_description module heliport.utils.url module heliport.version_control module heliport.version_control.admin module heliport.version_control.apps module heliport.version_control.interface module heliport.version_control.migrations module heliport.version_control.migrations.0001_initial module heliport.version_control.migrations.0002_remove_versioncontrol_link module heliport.version_control.models module heliport.version_control.serializers module heliport.version_control.tests module heliport.version_control.urls module heliport.version_control.views module heliport_config module heliport_config.asgi module heliport_config.celery module heliport_config.settings module heliport_config.urls module heliport_config.wsgi module heliport_groups (heliport.core.models.DigitalObject attribute) heliport_project (heliport.unicore.models.UnicoreResource attribute) heliport_project_id (heliport.unicore.models.UnicoreResource attribute) heliport_user (heliport.gate_connection.models.GateUser attribute) heliport_user_id (heliport.gate_connection.models.GateUser attribute) HeliportAppConf (class in heliport.core.conf) HeliportAppConf.Meta (class in heliport.core.conf) HeliportConfig (class in heliport.core.apps) HeliportGroup (class in heliport.core.models) HeliportGroup.DoesNotExist HeliportGroup.MultipleObjectsReturned HeliportHandlesAppConf (class in heliport.core.conf) HeliportHandlesAppConf.Meta (class in heliport.core.conf) HeliportLoginRequiredMixin (class in heliport.core.custom_views) HeliportModelViewSet (class in heliport.core.views) HeliportObjectListView (class in heliport.core.custom_views) HeliportObjectMixin (class in heliport.core.custom_views) HeliportObjectPermission (class in heliport.core.permissions) HeliportProjectMixin (class in heliport.core.custom_views) HeliportProjectPermission (class in heliport.core.permissions) HELIPORTTest (class in heliport.core.tests) HeliportUser (class in heliport.core.models) HeliportUser.DoesNotExist HeliportUser.MultipleObjectsReturned help (heliport.core.management.commands.import_user_data.Command attribute) (heliport.cwl_execution.management.commands.run_periodic_jobs.Command attribute) (heliport.gate_connection.management.commands.update_gate_projects.Command attribute) hex_color (heliport.core.models.Tag attribute) (heliport.digital_objects.models.VisualizationEdge attribute) holdsRoleInTime (heliport.core.vocabulary.PRO attribute) HOSTING_INSTITUTION (heliport.core.models.Contribution.ContributionTypes attribute) html_color (heliport.core.models.Tag property) (heliport.digital_objects.models.VisualizationEdge property) html_foreground_color (heliport.core.models.Tag property) html_id (heliport.utils.form_description.FormItem property) HtmlRenderer (class in heliport.core.serializers) hzdr_id (heliport.core.models.Project attribute) HZDR_ID_PREFIX (heliport.core.conf.HeliportAppConf attribute) HZDRGateProposalManager (class in heliport.gate_connection.proposal_management.hzdr_gate_proposal_management)

I

id (heliport.unicore.models.UnicoreResource attribute) Identifier (heliport.core.vocabulary.DATACITE attribute) identifier_display (heliport.core.models.DigitalObject property) identifier_label (heliport.core.models.DigitalObject property) identifier_link (heliport.core.models.DigitalObject property) identifier_scheme (heliport.core.models.DigitalObject property) IdentifierScheme (class in heliport.core.utils.IDs) (heliport.core.vocabulary.DATACITE attribute) ieee (heliport.core.vocabulary.DATACITE attribute) Image (class in heliport.core.models) image (heliport.core.models.DigitalObject attribute) Image (heliport.core.vocabulary.SemanticDesktop.NFO attribute) image (heliport.tables.models.TableCell attribute) IMAGE (heliport.tables.models.TableColumn.ColumnTypes attribute) Image.DoesNotExist Image.ImageStates (class in heliport.core.models) Image.MultipleObjectsReturned image_attributes() (in module heliport.core.serializers) image_id (heliport.tables.models.TableCell attribute) image_set (heliport.core.models.LoginInfo attribute) ImageDATACITESerializer (class in heliport.core.serializers) Images (class in heliport.core.interface) ImagesView (class in heliport.core.views) ImageUrlAttribute (class in heliport.core.serializers) ImageView (class in heliport.core.views) import_groups() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) import_users() (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.HZDRGateProposalManager method) (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.ProposalManager method) (heliport.gate_connection.proposal_management.user_management.User class method) import_users_and_groups() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) ImportFromProjectView (class in heliport.core.views) in_json (heliport.core.serializers.DigitalObjectAPISerializer.ID_KEY attribute) in_obj (heliport.core.serializers.DigitalObjectAPISerializer.ID_KEY attribute) included (heliport.core.app_interaction.ModuleSection property) included_list (heliport.core.app_interaction.ModuleSection property) index (heliport.tables.models.TableColumn attribute) index_to_edge_list() (heliport.digital_objects.views.ObjectGraphView method) IndexedSet (class in heliport.utils.collections) IndexView (class in heliport.core.views) infouri (heliport.core.vocabulary.DATACITE attribute) initial (heliport.archive.migrations.0001_initial.Migration attribute) (heliport.core.migrations.0001_initial.Migration attribute) (heliport.cwl_execution.migrations.0001_initial.Migration attribute) (heliport.data_management_plan.migrations.0001_initial.Migration attribute) (heliport.data_source.migrations.0001_initial.Migration attribute) (heliport.digital_objects.migrations.0001_initial.Migration attribute) (heliport.documentation.migrations.0001_initial.Migration attribute) (heliport.gate_connection.migrations.0001_initial.Migration attribute) (heliport.publication.migrations.0001_initial.Migration attribute) (heliport.sharelatex.migrations.0001_initial.Migration attribute) (heliport.tables.migrations.0001_initial.Migration attribute) (heliport.unicore.migrations.0001_initial.Migration attribute) (heliport.version_control.migrations.0001_initial.Migration attribute)

inline() (heliport.core.serializers.JsonLdRenderer class method) input_of (heliport.core.models.Vocabulary attribute) insert_core_vocabulary() (in module heliport.core.migrations.0016_insert_core_vocabulary) (in module heliport.core.vocabulary_core) insert_import_info() (heliport.version_control.views.VersionControlView static method) insert_user_objects() (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.HZDRGateProposalManager method) InternalValueDescription (class in heliport.core.attribute_description) interval (heliport.cwl_execution.models.Job attribute) is_always_public (heliport.core.attribute_description.BaseAttribute property) is_configured() (heliport.archive.interface.ArchiveModule method) (heliport.core.app_interaction.Module method) (heliport.core.app_interaction.ModuleSection method) (heliport.core.interface.Images method) (heliport.core.interface.ProjectConfigurationModule method) (heliport.core.interface.SubProjects method) (heliport.core.interface.Tags method) (heliport.core.interface.Timeline method) (heliport.cwl_execution.interface.ArbitraryCWLModule method) (heliport.cwl_execution.interface.JobModule method) (heliport.cwl_execution.interface.ToolModule method) (heliport.cwl_execution.interface.WorkflowModule method) (heliport.data_management_plan.interface.DataManagementPlanModule method) (heliport.data_source.interface.DataSourceModule method) (heliport.digital_objects.interface.ArchiveModule method) (heliport.digital_objects.interface.DigitalObjectsModule method) (heliport.documentation.interface.DocumentationModule method) (heliport.gate_connection.interface.GATEConnectionModule method) (heliport.publication.interface.PublicationModule method) (heliport.sharelatex.interface.ShareLaTeXModule method) (heliport.tables.interface.Tables method) (heliport.unicore.interface.Unicore method) (heliport.unicore.interface.UnicoreProjectJobs method) (heliport.version_control.interface.VersionControlModule method) is_external_link (heliport.utils.table_description.BoundTableAction property) is_link (heliport.utils.table_description.BoundTableAction property) is_object_member() (in module heliport.core.permissions) is_public (heliport.core.attribute_description.BoundAttribute property) (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) is_public_name (heliport.core.attribute_description.BaseAttribute property) is_resolvable() (in module heliport.core.utils.IDs) is_subclass (heliport.core.models.DigitalObject property) is_valid (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) (heliport.cwl_execution.cwl_helpers.cwl_parameter.AutoValue attribute) (heliport.cwl_execution.cwl_helpers.cwl_parameter.BooleanParameterValue property) (heliport.cwl_execution.cwl_helpers.cwl_parameter.ParameterValue property) is_version_of (heliport.core.models.Vocabulary attribute) isbn (heliport.core.vocabulary.DATACITE attribute) isni (heliport.core.vocabulary.DATACITE attribute) issn (heliport.core.vocabulary.DATACITE attribute) istc (heliport.core.vocabulary.DATACITE attribute)

J

Job (class in heliport.cwl_execution.models) job (heliport.core.models.DigitalObject attribute) (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) (heliport.cwl_execution.models.UserJobConfig attribute) Job.DoesNotExist Job.MultipleObjectsReturned Job.OutputCodes (class in heliport.cwl_execution.models) Job.StatusCodes (class in heliport.cwl_execution.models) job_config (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager attribute) job_count (heliport.cwl_execution.models.Executable property) job_folder (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) job_id (heliport.cwl_execution.models.Job attribute) (heliport.cwl_execution.models.UserJobConfig attribute) job_set (heliport.cwl_execution.models.Executable attribute) JobActionView (class in heliport.unicore.views) JobCreateView (class in heliport.cwl_execution.views) JobDATACITESerializer (class in heliport.cwl_execution.serializers) JobDebugView (class in heliport.cwl_execution.views)

JobDetailView (class in heliport.cwl_execution.views) JobListView (class in heliport.cwl_execution.views) JobModule (class in heliport.cwl_execution.interface) JobOutputView (class in heliport.cwl_execution.views) JobParameterValueView (class in heliport.cwl_execution.views) JobProfilingJsonView (class in heliport.cwl_execution.views) JobRawYamlView (class in heliport.cwl_execution.views) JobSerializer (class in heliport.cwl_execution.serializers) JobSerializer.Meta (class in heliport.cwl_execution.serializers) JobStartView (class in heliport.cwl_execution.views) JobStopView (class in heliport.cwl_execution.views) JobViewSet (class in heliport.cwl_execution.views) json (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) JSON (heliport.cwl_execution.models.Executable.CWLTypes attribute) json() (heliport.core.tests.HandleServerInteractionTest.ResponseObj method) json_header (heliport.core.tests.HandleServerInteractionTest attribute) json_load_dict() (in module heliport.cwl_execution.models) JsonLdRenderer (class in heliport.core.serializers) jst (heliport.core.vocabulary.DATACITE attribute)

K

key (heliport.core.models.LoginInfo attribute)

L

label (heliport.core.attribute_description.BaseAttribute property) (heliport.core.attribute_description.BoundAttribute property) (heliport.core.models.DigitalObject attribute) (heliport.core.models.Vocabulary attribute) (heliport.core.utils.IDs.IdentifierScheme attribute) (heliport.tables.models.TableColumn attribute) label_is_public (heliport.core.models.DigitalObject attribute) landing_page_url() (heliport.archive.tests.ProjectSerializeTest static method) (heliport.data_management_plan.tests.ProjectSerializeTest static method) (heliport.digital_objects.views.DigitalObjectViewSet method) (heliport.documentation.tests.ProjectSerializeTest static method) (heliport.publication.tests.ProjectSerializeTest static method) (heliport.sharelatex.tests.LatexTest static method) LandingPageByPersistentIDView (class in heliport.core.views) LandingPageRenderer (class in heliport.core.serializers) LandingPageView (class in heliport.core.views) last_category (heliport.core.models.DigitalObject property) last_complete_line (heliport.core.utils.command_line_execution.CommandResults property) last_line (heliport.core.utils.command_line_execution.CommandResults property) last_modified (heliport.core.models.DigitalObject attribute) last_modified_aggregate() (heliport.core.models.Project method) last_modified_is_public (heliport.core.models.DigitalObject attribute) last_update (heliport.tables.models.TableCell attribute) last_use_date (heliport.core.models.Tag attribute) latex_id (heliport.sharelatex.models.ShareLaTeX attribute) LatexSerializer (class in heliport.sharelatex.serializers) LatexSerializer.Meta (class in heliport.sharelatex.serializers) LatexTest (class in heliport.sharelatex.tests) LaTeXView (class in heliport.sharelatex.views) LatexViewSet (class in heliport.sharelatex.views) lattes (heliport.core.vocabulary.DATACITE attribute) LDAPUser (class in heliport.gate_connection.proposal_management.ldap_user_management) LdapUserInformationManager (class in heliport.core.user_logic.user_information_managers.manager_ldap) LdContext (class in heliport.core.utils.json_ld) LdContextEntry (class in heliport.core.utils.json_ld) LdJsonContextTest (class in heliport.core.tests) len_sum() (heliport.core.serializers.JsonLdRenderer static method) link (heliport.archive.models.Archive attribute) (heliport.data_management_plan.models.DataManagementPlan attribute) (heliport.documentation.models.Documentation attribute) (heliport.publication.models.Publication attribute) (heliport.sharelatex.models.ShareLaTeX attribute) (heliport.version_control.models.VersionControl attribute) linkedin (heliport.core.vocabulary.DATACITE attribute) lissn (heliport.core.vocabulary.DATACITE attribute) list_dir() (heliport.core.utils.command_line_execution.SSHCommandExecutor method) list_heading (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute)

list_serializer_class (heliport.core.serializers.DigitalObjectAPISerializer.Meta attribute) list_url (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute) ListOfQuerySets (class in heliport.core.utils.queries) ListT (class in heliport.core.attribute_description) ListT.ListDescription (class in heliport.core.attribute_description) LiteralTriple (class in heliport.core.vocabulary_descriptor) load_cwltool() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) load_node_js() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) load_venv() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) loc (heliport.core.vocabulary.DATACITE attribute) local_contact_gate_projects (heliport.core.models.HeliportUser attribute) local_contacts (heliport.gate_connection.models.GateProject attribute) LOCAL_DIGITAL_OBJECT_HOST (heliport.core.conf.HeliportHandlesAppConf attribute) local_url() (heliport.core.models.DigitalObject method) login (heliport.core.models.Image attribute) (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) (heliport.data_source.models.DataSource attribute) login() (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) login_id (heliport.core.models.Image attribute) (heliport.data_source.models.DataSource attribute) login_info_id (heliport.core.models.LoginInfo attribute) login_url (heliport.core.custom_views.HeliportLoginRequiredMixin attribute) LoginInfo (class in heliport.core.models) LoginInfo.DoesNotExist LoginInfo.LoginTypes (class in heliport.core.models) LoginInfo.MultipleObjectsReturned logininfo_set (heliport.core.models.HeliportUser attribute) (heliport.core.models.LoginInfo attribute) LoginInfoUpdateView (class in heliport.core.views) LoginInfoView (class in heliport.core.views) LoginNamedTokenView (class in heliport.core.views) LoginView (class in heliport.core.views) LogoutTokenView (class in heliport.core.views) LogoutView (class in heliport.core.views) lowest_matching_key() (in module heliport.core.utils.json_ld) lsid (heliport.core.vocabulary.DATACITE attribute)

M

machine (heliport.core.models.LoginInfo attribute) main() (in module heliport.cwl_execution.cwl_helpers.cwl2rdf) (in module manage) MAINTENANCE_MESSAGE (heliport.core.conf.HeliportAppConf attribute) MAINTENANCE_MESSAGE_LEVEL (heliport.core.conf.HeliportAppConf attribute) MaintenanceMessageView (class in heliport.core.views) make_array() (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) make_link_attribute() (in module heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link) (in module heliport.documentation.migrations.0002_remove_documentation_link) (in module heliport.publication.migrations.0002_remove_publication_url) (in module heliport.sharelatex.migrations.0002_remove_sharelatex_url) (in module heliport.version_control.migrations.0002_remove_versioncontrol_link) make_link_db_field() (in module heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link) (in module heliport.documentation.migrations.0002_remove_documentation_link) (in module heliport.publication.migrations.0002_remove_publication_url) (in module heliport.sharelatex.migrations.0002_remove_sharelatex_url) (in module heliport.version_control.migrations.0002_remove_versioncontrol_link) make_optional() (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) make_parameter_pure_and_extract_data_source_to_copy() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) manage module Manuscript (heliport.core.vocabulary.FABIO attribute) ManyAttribute (class in heliport.core.attribute_description) mapping_target (heliport.core.utils.json_ld.TargetDescription attribute) match_condition (heliport.core.utils.json_ld.LdContextEntry property) media (heliport.core.admin.ProjectAdmin property) members() (heliport.core.models.DigitalObject method) members_is_public (heliport.core.models.DigitalObject attribute) memory_usage (heliport.cwl_execution.models.ExecutionLog attribute) memory_usage_bytes (heliport.cwl_execution.models.ExecutionLog property) memory_usage_dict (heliport.cwl_execution.models.ExecutionLog property) message (heliport.core.models.Image attribute) MESSAGE (heliport.cwl_execution.models.Job.OutputCodes attribute) MetadataBoundField (class in heliport.core.serializers) MetadataField (class in heliport.core.models) MetadataRestField (class in heliport.core.serializers) MetadataScheme (heliport.core.vocabulary.DATACITE attribute) methods (heliport.core.vocabulary.DATACITE attribute) Migration (class in heliport.archive.migrations.0001_initial) (class in heliport.archive.migrations.0002_remove_archive_archive_number_remove_archive_url) (class in heliport.core.migrations.0001_initial) (class in heliport.core.migrations.0002_auto_20220224_1552) (class in heliport.core.migrations.0003_image) (class in heliport.core.migrations.0004_auto_20220314_1014) (class in heliport.core.migrations.0005_logininfo_encrypted_password) (class in heliport.core.migrations.0006_auto_20220322_1052) (class in heliport.core.migrations.0007_remove_logininfo_password) (class in heliport.core.migrations.0008_rebuild_group_model) (class in heliport.core.migrations.0009_heliportuser_affiliation_contribution) (class in heliport.core.migrations.0010_contribution_type) (class in heliport.core.migrations.0011_set_digitalobject_role) (class in heliport.core.migrations.0012_auto_20220401_1204) (class in heliport.core.migrations.0013_timelineconfiguration) (class in heliport.core.migrations.0014_tag) (class in heliport.core.migrations.0015_digitalobject_last_modified) (class in heliport.core.migrations.0016_insert_core_vocabulary) (class in heliport.core.migrations.0017_digitalobjectrelation_is_public_and_more) (class in heliport.core.migrations.0018_digitalobject_description_is_public_and_more) (class in heliport.core.migrations.0019_digitalobject_last_modified_is_public) (class in heliport.core.migrations.0020_namedtoken) (class in heliport.cwl_execution.migrations.0001_initial) (class in heliport.cwl_execution.migrations.0002_executionlog_error_message_executionlog_output_code_and_more) (class in heliport.cwl_execution.migrations.0003_executable_cwl_is_public_and_more) (class in heliport.data_management_plan.migrations.0001_initial) (class in heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link) (class in heliport.data_source.migrations.0001_initial) (class in heliport.data_source.migrations.0002_datasource_generated_inside) (class in heliport.digital_objects.migrations.0001_initial) (class in heliport.documentation.migrations.0001_initial) (class in heliport.documentation.migrations.0002_remove_documentation_link) (class in heliport.gate_connection.migrations.0001_initial) (class in heliport.publication.migrations.0001_initial) (class in heliport.publication.migrations.0002_remove_publication_url) (class in heliport.sharelatex.migrations.0001_initial) (class in heliport.sharelatex.migrations.0002_remove_sharelatex_url) (class in heliport.tables.migrations.0001_initial) (class in heliport.tables.migrations.0002_tablecell_image) (class in heliport.tables.migrations.0003_auto_20220321_1736) (class in heliport.unicore.migrations.0001_initial) (class in heliport.unicore.migrations.0002_unicoreresource_heliport_project) (class in heliport.version_control.migrations.0001_initial) (class in heliport.version_control.migrations.0002_remove_versioncontrol_link) mimetype (heliport.core.models.Image property) mimeType (heliport.core.vocabulary.SemanticDesktop.NIE attribute) model (heliport.archive.serializers.ArchiveSerializer.Meta attribute) (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.serializers.ContributionSerializer.Meta attribute) (heliport.core.serializers.DigitalObjectAPISerializer.Meta attribute) (heliport.core.serializers.GroupSerializer.Meta attribute) (heliport.core.serializers.ProjectSerializer.Meta attribute) (heliport.core.serializers.TokenSerializer.Meta attribute) (heliport.core.serializers.UserSerializer.Meta attribute) (heliport.core.views.ImageView attribute) (heliport.core.views.LandingPageView attribute) (heliport.core.views.LoginInfoUpdateView attribute) (heliport.core.views.LoginInfoView attribute) (heliport.core.views.ProjectGraphView attribute) (heliport.core.views.ProjectListView attribute) (heliport.core.views.ProjectUpdateView attribute) (heliport.core.views.ProjectView attribute) (heliport.core.views.PublicLandingPageView attribute) (heliport.core.views.RemoteServerLoginView attribute) (heliport.core.views.SubprojectsView attribute) (heliport.core.views.TagAutocompleteView attribute) (heliport.core.views.TagJsonView attribute) (heliport.core.views.TagsView attribute) (heliport.cwl_execution.serializers.ExecutableSerializer.Meta attribute) (heliport.cwl_execution.serializers.JobSerializer.Meta attribute) (heliport.cwl_execution.serializers.UserJobConfigSerializer.Meta attribute) (heliport.cwl_execution.views.ArbitraryCWLListView attribute) (heliport.cwl_execution.views.ArbitraryCWLUpdateView attribute) (heliport.cwl_execution.views.ExecutableRawJsonView attribute) (heliport.cwl_execution.views.ExecutableRawYamlView attribute) (heliport.cwl_execution.views.JobCreateView attribute) (heliport.cwl_execution.views.JobDebugView attribute) (heliport.cwl_execution.views.JobDetailView attribute) (heliport.cwl_execution.views.JobListView attribute) (heliport.cwl_execution.views.JobOutputView attribute) (heliport.cwl_execution.views.JobProfilingJsonView attribute) (heliport.cwl_execution.views.JobRawYamlView attribute) (heliport.cwl_execution.views.JobStartView attribute) (heliport.cwl_execution.views.JobStopView attribute) (heliport.cwl_execution.views.RunningJobsView attribute) (heliport.cwl_execution.views.ToolJsonDescriptionView attribute) (heliport.cwl_execution.views.ToolListView attribute) (heliport.cwl_execution.views.ToolUpdateView attribute) (heliport.cwl_execution.views.VisualizationDataView attribute) (heliport.cwl_execution.views.WorkflowCreateView attribute) (heliport.cwl_execution.views.WorkflowListView attribute) (heliport.cwl_execution.views.WorkflowUpdateView attribute) (heliport.data_management_plan.serializers.DataManagementPlanSerializer.Meta attribute) (heliport.data_management_plan.views.DataManagementPlanUpdateView attribute) (heliport.data_management_plan.views.DataManagementPlanView attribute) (heliport.data_source.serializers.DataSourceSerializer.Meta attribute) (heliport.data_source.views.DataSourceUpdateView attribute) (heliport.data_source.views.DataSourceView attribute) (heliport.data_source.views.SSHDataSourceOpenView attribute) (heliport.data_source.views.SubDataSourceCreateView attribute) (heliport.digital_objects.serializers.DigitalObjectRelationSerializer.Meta attribute) (heliport.digital_objects.serializers.DigitalObjectSerializer.Meta attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.digital_objects.views.ObjectGraphView attribute) (heliport.documentation.serializers.DocumentationSerializer.Meta attribute) (heliport.documentation.views.DocumentationUpdateView attribute) (heliport.documentation.views.DocumentationView attribute) (heliport.gate_connection.serializers.GateProjectSerializer.Meta attribute) (heliport.gate_connection.serializers.GateUserSerializer.Meta attribute) (heliport.gate_connection.views.ConnectedToGateProjectView attribute) (heliport.gate_connection.views.ConnectToGateProjectView attribute) (heliport.publication.serializers.PublicationSerializer.Meta attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.serializers.LatexSerializer.Meta attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TableDataView attribute) (heliport.tables.views.TableDeleteColumnView attribute) (heliport.tables.views.TableDeleteRowView attribute) (heliport.tables.views.TableEditView attribute) (heliport.tables.views.TableResetCellView attribute) (heliport.tables.views.TablesView attribute) (heliport.tables.views.TableUpdateColumnView attribute) (heliport.tables.views.TableUpdateRowView attribute) (heliport.version_control.serializers.VersionControlSerializer.Meta attribute) (heliport.version_control.views.VersionControlUpdateView attribute) (heliport.version_control.views.VersionControlView attribute) module heliport heliport.archive heliport.archive.admin heliport.archive.apps heliport.archive.interface heliport.archive.migrations heliport.archive.migrations.0001_initial heliport.archive.migrations.0002_remove_archive_archive_number_remove_archive_url heliport.archive.models heliport.archive.serializers heliport.archive.tests heliport.archive.urls heliport.archive.views heliport.core heliport.core.admin heliport.core.app_interaction heliport.core.apps heliport.core.attribute_description heliport.core.conf heliport.core.custom_views heliport.core.interface heliport.core.management heliport.core.management.commands heliport.core.management.commands.import_user_data heliport.core.middleware heliport.core.middleware.never_cache_middleware heliport.core.migrations heliport.core.migrations.0001_initial heliport.core.migrations.0002_auto_20220224_1552 heliport.core.migrations.0003_image heliport.core.migrations.0004_auto_20220314_1014 heliport.core.migrations.0005_logininfo_encrypted_password heliport.core.migrations.0006_auto_20220322_1052 heliport.core.migrations.0007_remove_logininfo_password heliport.core.migrations.0008_rebuild_group_model heliport.core.migrations.0009_heliportuser_affiliation_contribution heliport.core.migrations.0010_contribution_type heliport.core.migrations.0011_set_digitalobject_role heliport.core.migrations.0012_auto_20220401_1204 heliport.core.migrations.0013_timelineconfiguration heliport.core.migrations.0014_tag heliport.core.migrations.0015_digitalobject_last_modified heliport.core.migrations.0016_insert_core_vocabulary heliport.core.migrations.0017_digitalobjectrelation_is_public_and_more heliport.core.migrations.0018_digitalobject_description_is_public_and_more heliport.core.migrations.0019_digitalobject_last_modified_is_public heliport.core.migrations.0020_namedtoken heliport.core.models heliport.core.permissions heliport.core.serializers heliport.core.tasks heliport.core.templatetags heliport.core.templatetags.heliport heliport.core.tests heliport.core.urls heliport.core.user_logic heliport.core.user_logic.remote_login heliport.core.user_logic.user_information heliport.core.user_logic.user_information_managers heliport.core.user_logic.user_information_managers.manager_ldap heliport.core.user_logic.user_information_managers.managers heliport.core.utils heliport.core.utils.command_line_execution heliport.core.utils.encryption heliport.core.utils.handles heliport.core.utils.IDs heliport.core.utils.json_ld heliport.core.utils.normalization heliport.core.utils.queries heliport.core.utils.version heliport.core.views heliport.core.vocabulary heliport.core.vocabulary_core heliport.core.vocabulary_descriptor heliport.cwl_execution heliport.cwl_execution.admin heliport.cwl_execution.apps heliport.cwl_execution.conf heliport.cwl_execution.cwl_helpers heliport.cwl_execution.cwl_helpers.cwl2rdf heliport.cwl_execution.cwl_helpers.cwl_execution heliport.cwl_execution.cwl_helpers.cwl_generation heliport.cwl_execution.cwl_helpers.cwl_job heliport.cwl_execution.cwl_helpers.cwl_parameter heliport.cwl_execution.cwl_helpers.cwl_tool heliport.cwl_execution.cwl_helpers.cwl_workflow heliport.cwl_execution.interface heliport.cwl_execution.management heliport.cwl_execution.management.commands heliport.cwl_execution.management.commands.run_periodic_jobs heliport.cwl_execution.migrations heliport.cwl_execution.migrations.0001_initial heliport.cwl_execution.migrations.0002_executionlog_error_message_executionlog_output_code_and_more heliport.cwl_execution.migrations.0003_executable_cwl_is_public_and_more heliport.cwl_execution.models heliport.cwl_execution.serializers heliport.cwl_execution.tasks heliport.cwl_execution.tests heliport.cwl_execution.urls heliport.cwl_execution.views heliport.data_management_plan heliport.data_management_plan.admin heliport.data_management_plan.apps heliport.data_management_plan.interface heliport.data_management_plan.migrations heliport.data_management_plan.migrations.0001_initial heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link heliport.data_management_plan.models heliport.data_management_plan.serializers heliport.data_management_plan.tests heliport.data_management_plan.urls heliport.data_management_plan.views heliport.data_source heliport.data_source.admin heliport.data_source.apps heliport.data_source.interface heliport.data_source.migrations heliport.data_source.migrations.0001_initial heliport.data_source.migrations.0002_datasource_generated_inside heliport.data_source.models heliport.data_source.serializers heliport.data_source.tests heliport.data_source.urls heliport.data_source.views heliport.digital_objects heliport.digital_objects.admin heliport.digital_objects.apps heliport.digital_objects.interface heliport.digital_objects.migrations heliport.digital_objects.migrations.0001_initial heliport.digital_objects.models heliport.digital_objects.serializers heliport.digital_objects.tests heliport.digital_objects.urls heliport.digital_objects.views heliport.documentation heliport.documentation.admin heliport.documentation.apps heliport.documentation.interface heliport.documentation.migrations heliport.documentation.migrations.0001_initial heliport.documentation.migrations.0002_remove_documentation_link heliport.documentation.models heliport.documentation.serializers heliport.documentation.tests heliport.documentation.urls heliport.documentation.views heliport.gate_connection heliport.gate_connection.admin heliport.gate_connection.apps heliport.gate_connection.conf heliport.gate_connection.interface heliport.gate_connection.management heliport.gate_connection.management.commands heliport.gate_connection.management.commands.update_gate_projects heliport.gate_connection.migrations heliport.gate_connection.migrations.0001_initial heliport.gate_connection.models heliport.gate_connection.proposal_management heliport.gate_connection.proposal_management.gate_user_management heliport.gate_connection.proposal_management.hzdr_gate_proposal_management heliport.gate_connection.proposal_management.ldap_user_management heliport.gate_connection.proposal_management.use_cases heliport.gate_connection.proposal_management.user_management heliport.gate_connection.serializers heliport.gate_connection.tasks heliport.gate_connection.tests heliport.gate_connection.urls heliport.gate_connection.views heliport.publication heliport.publication.admin heliport.publication.apps heliport.publication.interface heliport.publication.migrations heliport.publication.migrations.0001_initial heliport.publication.migrations.0002_remove_publication_url heliport.publication.models heliport.publication.serializers heliport.publication.tests heliport.publication.urls heliport.publication.views heliport.sharelatex heliport.sharelatex.admin heliport.sharelatex.apps heliport.sharelatex.interface heliport.sharelatex.migrations heliport.sharelatex.migrations.0001_initial heliport.sharelatex.migrations.0002_remove_sharelatex_url heliport.sharelatex.models heliport.sharelatex.serializers heliport.sharelatex.tests heliport.sharelatex.urls heliport.sharelatex.views heliport.tables heliport.tables.admin heliport.tables.apps heliport.tables.interface heliport.tables.migrations heliport.tables.migrations.0001_initial heliport.tables.migrations.0002_tablecell_image heliport.tables.migrations.0003_auto_20220321_1736 heliport.tables.models heliport.tables.tests heliport.tables.urls heliport.tables.views heliport.unicore heliport.unicore.admin heliport.unicore.apps heliport.unicore.conf heliport.unicore.decorators heliport.unicore.interface heliport.unicore.migrations heliport.unicore.migrations.0001_initial heliport.unicore.migrations.0002_unicoreresource_heliport_project heliport.unicore.mixins heliport.unicore.models heliport.unicore.tests heliport.unicore.urls heliport.unicore.views heliport.utils heliport.utils.collections heliport.utils.colors heliport.utils.form_description heliport.utils.string_tools heliport.utils.table_description heliport.utils.url heliport.version_control heliport.version_control.admin heliport.version_control.apps heliport.version_control.interface heliport.version_control.migrations heliport.version_control.migrations.0001_initial heliport.version_control.migrations.0002_remove_versioncontrol_link heliport.version_control.models heliport.version_control.serializers heliport.version_control.tests heliport.version_control.urls heliport.version_control.views heliport_config heliport_config.asgi heliport_config.celery heliport_config.settings heliport_config.urls heliport_config.wsgi manage

Module (class in heliport.core.app_interaction) module_id (heliport.archive.interface.ArchiveModule attribute) (heliport.core.app_interaction.Module property) (heliport.core.interface.Images attribute) (heliport.core.interface.ProjectConfigurationModule attribute) (heliport.core.interface.SubProjects attribute) (heliport.core.interface.Tags attribute) (heliport.core.interface.Timeline attribute) (heliport.cwl_execution.interface.ArbitraryCWLModule attribute) (heliport.cwl_execution.interface.JobModule attribute) (heliport.cwl_execution.interface.ToolModule attribute) (heliport.cwl_execution.interface.WorkflowModule attribute) (heliport.data_management_plan.interface.DataManagementPlanModule attribute) (heliport.data_source.interface.DataSourceModule attribute) (heliport.digital_objects.interface.ArchiveModule attribute) (heliport.digital_objects.interface.DigitalObjectsModule attribute) (heliport.documentation.interface.DocumentationModule attribute) (heliport.gate_connection.interface.GATEConnectionModule attribute) (heliport.publication.interface.PublicationModule attribute) (heliport.sharelatex.interface.ShareLaTeXModule attribute) (heliport.tables.interface.Tables attribute) (heliport.unicore.interface.Unicore attribute) (heliport.unicore.interface.UnicoreProjectJobs attribute) (heliport.version_control.interface.VersionControlModule attribute) ModuleSection (class in heliport.core.app_interaction)

N

name (heliport.archive.apps.ArchiveConfig attribute) (heliport.archive.interface.ArchiveModule attribute) (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.app_interaction.Module property) (heliport.core.apps.HeliportConfig attribute) (heliport.core.interface.Images attribute) (heliport.core.interface.ProjectConfigurationModule attribute) (heliport.core.interface.SubProjects attribute) (heliport.core.interface.Tags attribute) (heliport.core.interface.Timeline attribute) (heliport.core.models.LoginInfo attribute) (heliport.core.models.NamedToken attribute) (heliport.core.serializers.DataCiteJSONRenderer attribute) (heliport.core.serializers.DataCiteRenderer attribute) (heliport.core.serializers.HtmlRenderer attribute) (heliport.core.serializers.JsonLdRenderer attribute) (heliport.core.serializers.LandingPageRenderer attribute) (heliport.core.serializers.RdfXmlRenderer attribute) (heliport.core.serializers.TripleRenderer attribute) (heliport.core.serializers.TurtleRenderer attribute) (heliport.core.utils.json_ld.TargetDescription attribute) (heliport.core.views.ContributionViewSet attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.apps.CwlExecutionConfig attribute) (heliport.cwl_execution.interface.ArbitraryCWLModule attribute) (heliport.cwl_execution.interface.JobModule attribute) (heliport.cwl_execution.interface.ToolModule attribute) (heliport.cwl_execution.interface.WorkflowModule attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.apps.DataManagementPlanConfig attribute) (heliport.data_management_plan.interface.DataManagementPlanModule attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.apps.DataSourceConfig attribute) (heliport.data_source.interface.DataSourceModule attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.apps.DigitalObjectsConfig attribute) (heliport.digital_objects.interface.ArchiveModule attribute) (heliport.digital_objects.interface.DigitalObjectsModule attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.apps.DocumentationConfig attribute) (heliport.documentation.interface.DocumentationModule attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.apps.GateConnectionConfig attribute) (heliport.gate_connection.interface.GATEConnectionModule attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.apps.PublicationConfig attribute) (heliport.publication.interface.PublicationModule attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.apps.SharelatexConfig attribute) (heliport.sharelatex.interface.ShareLaTeXModule attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.tables.apps.TablesConfig attribute) (heliport.tables.interface.Tables attribute) (heliport.unicore.apps.UnicoreConfig attribute) (heliport.unicore.interface.Unicore attribute) (heliport.unicore.interface.UnicoreProjectJobs attribute) (heliport.version_control.apps.VersionControlConfig attribute) (heliport.version_control.interface.VersionControlModule attribute) (heliport.version_control.views.VersionControlViewSet attribute)

NamedToken (class in heliport.core.models) NamedToken.DoesNotExist NamedToken.MultipleObjectsReturned Namespace (heliport.core.models.Vocabulary attribute) nihmsid (heliport.core.vocabulary.DATACITE attribute) nii (heliport.core.vocabulary.DATACITE attribute) not_subclass_query() (heliport.core.models.DigitalObject static method) NUMBER (heliport.tables.models.TableColumn.ColumnTypes attribute)

O

obj (heliport.core.models.FromDB property) (heliport.digital_objects.views.ObjectGraphView.EdgeType attribute) object (heliport.core.models.DigitalObjectRelation attribute) object_field (heliport.core.attribute_description.Attribute attribute) object_graph_id (heliport.digital_objects.models.ObjectGraph attribute) object_id (heliport.core.models.DigitalObjectRelation attribute) ObjectGraph (class in heliport.digital_objects.models) objectgraph (heliport.core.models.DigitalObject attribute) ObjectGraph.DoesNotExist ObjectGraph.MultipleObjectsReturned ObjectGraphListView (class in heliport.digital_objects.views) ObjectGraphView (class in heliport.digital_objects.views) ObjectGraphView.Edge (class in heliport.digital_objects.views) ObjectGraphView.EdgeType (class in heliport.digital_objects.views) objects (heliport.core.models.Contribution attribute) (heliport.core.models.DigitalObject attribute) (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) (heliport.core.models.Group attribute) (heliport.core.models.HeliportGroup attribute) (heliport.core.models.HeliportUser attribute) (heliport.core.models.LoginInfo attribute) (heliport.core.models.NamedToken attribute) (heliport.core.models.TimelineConfiguration attribute) (heliport.cwl_execution.models.ExecutionLog attribute) (heliport.cwl_execution.models.UserJobConfig attribute) (heliport.digital_objects.models.PropertyPath attribute) (heliport.digital_objects.models.VisualizationEdge attribute) (heliport.gate_connection.models.GateUser attribute) (heliport.tables.models.TableCell attribute) (heliport.tables.models.TableColumn attribute) (heliport.tables.models.TableRow attribute) (heliport.unicore.models.UnicoreResource attribute) objects() (heliport.core.vocabulary_descriptor.LiteralTriple method) (heliport.core.vocabulary_descriptor.PropertyList method) (heliport.core.vocabulary_descriptor.RelationTriple method) (heliport.core.vocabulary_descriptor.TripleDescription method) ObjectsView (class in heliport.digital_objects.views) oci (heliport.core.vocabulary.DATACITE attribute) oclc (heliport.core.vocabulary.DATACITE attribute) OK (heliport.core.models.Image.ImageStates attribute) openid (heliport.core.vocabulary.DATACITE attribute) operations (heliport.archive.migrations.0001_initial.Migration attribute) (heliport.archive.migrations.0002_remove_archive_archive_number_remove_archive_url.Migration attribute) (heliport.core.migrations.0001_initial.Migration attribute) (heliport.core.migrations.0002_auto_20220224_1552.Migration attribute) (heliport.core.migrations.0003_image.Migration attribute) (heliport.core.migrations.0004_auto_20220314_1014.Migration attribute) (heliport.core.migrations.0005_logininfo_encrypted_password.Migration attribute) (heliport.core.migrations.0006_auto_20220322_1052.Migration attribute) (heliport.core.migrations.0007_remove_logininfo_password.Migration attribute) (heliport.core.migrations.0008_rebuild_group_model.Migration attribute) (heliport.core.migrations.0009_heliportuser_affiliation_contribution.Migration attribute) (heliport.core.migrations.0010_contribution_type.Migration attribute) (heliport.core.migrations.0011_set_digitalobject_role.Migration attribute) (heliport.core.migrations.0012_auto_20220401_1204.Migration attribute) (heliport.core.migrations.0013_timelineconfiguration.Migration attribute) (heliport.core.migrations.0014_tag.Migration attribute) (heliport.core.migrations.0015_digitalobject_last_modified.Migration attribute) (heliport.core.migrations.0016_insert_core_vocabulary.Migration attribute) (heliport.core.migrations.0017_digitalobjectrelation_is_public_and_more.Migration attribute) (heliport.core.migrations.0018_digitalobject_description_is_public_and_more.Migration attribute) (heliport.core.migrations.0019_digitalobject_last_modified_is_public.Migration attribute) (heliport.core.migrations.0020_namedtoken.Migration attribute) (heliport.cwl_execution.migrations.0001_initial.Migration attribute) (heliport.cwl_execution.migrations.0002_executionlog_error_message_executionlog_output_code_and_more.Migration attribute) (heliport.cwl_execution.migrations.0003_executable_cwl_is_public_and_more.Migration attribute) (heliport.data_management_plan.migrations.0001_initial.Migration attribute) (heliport.data_management_plan.migrations.0002_remove_datamanagementplan_link.Migration attribute) (heliport.data_source.migrations.0001_initial.Migration attribute) (heliport.data_source.migrations.0002_datasource_generated_inside.Migration attribute) (heliport.digital_objects.migrations.0001_initial.Migration attribute) (heliport.documentation.migrations.0001_initial.Migration attribute) (heliport.documentation.migrations.0002_remove_documentation_link.Migration attribute) (heliport.gate_connection.migrations.0001_initial.Migration attribute) (heliport.publication.migrations.0001_initial.Migration attribute) (heliport.publication.migrations.0002_remove_publication_url.Migration attribute) (heliport.sharelatex.migrations.0001_initial.Migration attribute) (heliport.sharelatex.migrations.0002_remove_sharelatex_url.Migration attribute) (heliport.tables.migrations.0001_initial.Migration attribute) (heliport.tables.migrations.0002_tablecell_image.Migration attribute) (heliport.tables.migrations.0003_auto_20220321_1736.Migration attribute) (heliport.unicore.migrations.0001_initial.Migration attribute) (heliport.unicore.migrations.0002_unicoreresource_heliport_project.Migration attribute) (heliport.version_control.migrations.0001_initial.Migration attribute) (heliport.version_control.migrations.0002_remove_versioncontrol_link.Migration attribute)

orcid (heliport.core.models.HeliportUser attribute) (heliport.core.vocabulary.DATACITE attribute) OrganizationIdentifier (heliport.core.vocabulary.DATACITE attribute) OrganizationIdentifierScheme (heliport.core.vocabulary.DATACITE attribute) original_id (heliport.core.models.Project attribute) (heliport.cwl_execution.models.Executable attribute) (heliport.cwl_execution.models.ExecutionLog attribute) (heliport.cwl_execution.models.Job attribute) (heliport.cwl_execution.models.UserJobConfig attribute) original_key (heliport.core.utils.json_ld.LdContextEntry property) OTHER (heliport.core.models.Contribution.ContributionTypes attribute) other (heliport.core.vocabulary.DATACITE attribute) output_code (heliport.cwl_execution.models.ExecutionLog attribute) (heliport.cwl_execution.models.Job attribute) output_text (heliport.cwl_execution.models.Job attribute) Overview (class in heliport.unicore.views) overwrite_property_id (heliport.core.attribute_description.BaseAttribute property) owner (heliport.core.models.DigitalObject attribute) owner_id (heliport.core.models.DigitalObject attribute)

P

parameter_details (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) parameters (heliport.cwl_execution.models.Executable property) ParameterValue (class in heliport.cwl_execution.cwl_helpers.cwl_parameter) parent_table (heliport.tables.models.TableColumn attribute) (heliport.tables.models.TableRow attribute) parent_table_id (heliport.tables.models.TableColumn attribute) (heliport.tables.models.TableRow attribute) parse_date_time() (in module heliport.utils.string_tools) parse_memory_units() (heliport.cwl_execution.models.ExecutionLog static method) parse_user_cwl() (in module heliport.cwl_execution.cwl_helpers.cwl_generation) parts_is_public (heliport.core.models.Project attribute) PASS (heliport.gate_connection.conf.GateConnectionAppConf attribute) password (heliport.core.models.LoginInfo property) path (heliport.core.models.Image property) (heliport.data_source.models.DataSource property) (heliport.digital_objects.models.VisualizationEdge attribute) (heliport.digital_objects.views.ObjectGraphView.EdgeType attribute) (heliport.unicore.tests.TestCallbackView attribute) path_id (heliport.digital_objects.models.VisualizationEdge attribute) path_list (heliport.digital_objects.models.VisualizationEdge property) PAUSED (heliport.cwl_execution.models.Job.StatusCodes attribute) perform_destroy() (heliport.core.views.HeliportModelViewSet method) permission (heliport.core.models.DigitalObject attribute) permission_class (heliport.core.views.ContributionViewSet attribute) permission_classes (heliport.core.views.DeleteAllTokensView attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.HeliportModelViewSet attribute) (heliport.core.views.LogoutTokenView attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) permission_denied_message (heliport.core.custom_views.HeliportLoginRequiredMixin attribute) persistent_id (heliport.core.attribute_description.BaseAttribute property) (heliport.core.models.DigitalObject attribute) PersonalCommunication (heliport.core.vocabulary.FABIO attribute) PersonalIdentifier (heliport.core.vocabulary.DATACITE attribute) PersonalIdentifierScheme (heliport.core.vocabulary.DATACITE attribute) PersonT (class in heliport.core.attribute_description) pick_color() (in module heliport.utils.colors) pick_color_not_in() (in module heliport.utils.colors) pick_foreground_color() (in module heliport.utils.colors) pii (heliport.core.vocabulary.DATACITE attribute) pk_url_kwarg (heliport.core.views.ProjectGraphView attribute) (heliport.core.views.ProjectUpdateView attribute) (heliport.core.views.ProjectView attribute) (heliport.core.views.SubprojectsView attribute) (heliport.core.views.TagAutocompleteView attribute) (heliport.core.views.TagJsonView attribute) (heliport.cwl_execution.views.JobCreateView attribute) (heliport.cwl_execution.views.JobProfilingJsonView attribute) (heliport.cwl_execution.views.RunningJobsView attribute) (heliport.gate_connection.views.ConnectedToGateProjectView attribute) pmcid (heliport.core.vocabulary.DATACITE attribute) pmid (heliport.core.vocabulary.DATACITE attribute) post() (heliport.core.custom_views.HeliportObjectListView method) (heliport.core.views.CreateProjectView method) (heliport.core.views.DeleteAllTokensView method) (heliport.core.views.ImagesView method) (heliport.core.views.ImportFromProjectView method) (heliport.core.views.LandingPageView method) (heliport.core.views.LoginInfoView method) (heliport.core.views.LoginView method) (heliport.core.views.LogoutTokenView method) (heliport.core.views.ProjectTimelineView method) (heliport.core.views.ProjectView method) (heliport.core.views.RegisterView method) (heliport.core.views.RemoteServerLoginView method) (heliport.core.views.SubprojectsView method) (heliport.core.views.TagJsonView method) (heliport.core.views.TakePictureView method) (heliport.core.views.UserSettingsView method) (heliport.cwl_execution.views.ArbitraryCWLListView method) (heliport.cwl_execution.views.ArbitraryCWLUpdateView method) (heliport.cwl_execution.views.JobCreateView method) (heliport.cwl_execution.views.JobListView method) (heliport.cwl_execution.views.PublicationWorkflowCreateView method) (heliport.cwl_execution.views.ToolCreateView method) (heliport.cwl_execution.views.ToolListView method) (heliport.cwl_execution.views.ToolUpdateView method) (heliport.cwl_execution.views.WorkflowCreateView method) (heliport.cwl_execution.views.WorkflowListView method) (heliport.cwl_execution.views.WorkflowUpdateView method) (heliport.data_management_plan.views.DataManagementPlanView method) (heliport.data_source.views.DataSourceView method) (heliport.data_source.views.SubDataSourceCreateView method) (heliport.digital_objects.views.DigitalObjectDeleteView method) (heliport.digital_objects.views.ObjectGraphView method) (heliport.digital_objects.views.ObjectsView method) (heliport.digital_objects.views.SaveCategoryView method) (heliport.documentation.views.DocumentationView method) (heliport.gate_connection.views.ConnectedToGateProjectView method) (heliport.gate_connection.views.ConnectToGateProjectView method) (heliport.tables.views.TableDeleteColumnView method) (heliport.tables.views.TableDeleteRowView method) (heliport.tables.views.TableResetCellView method) (heliport.tables.views.TableUpdateColumnView method) (heliport.tables.views.TableUpdateRowView method) (heliport.unicore.views.CallbackView method) (heliport.version_control.views.VersionControlView method) post_migrate_handler() (in module heliport.core.apps) post_notification() (heliport.unicore.tests.TestCallbackView method) predicate (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) (heliport.digital_objects.views.DigitalObjectPropertiesView.AttributeInfo attribute)

predicate_attributes (heliport.core.models.DigitalObject attribute) predicate_id (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) predicate_relations (heliport.core.models.DigitalObject attribute) prefix (heliport.core.conf.HeliportAppConf.Meta attribute) PREFIX (heliport.core.conf.HeliportHandlesAppConf attribute) prefix (heliport.core.conf.HeliportHandlesAppConf.Meta attribute) (heliport.core.utils.IDs.IdentifierScheme attribute) (heliport.core.vocabulary.WIKIDATA attribute) (heliport.cwl_execution.conf.CwlExecutionAppConf.Meta attribute) (heliport.gate_connection.conf.GateConnectionAppConf.Meta attribute) (heliport.unicore.conf.UnicoreAppConf.Meta attribute) prepare_job_folder() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) primary_topic (heliport.core.models.Vocabulary attribute) PrimaryResourceIdentifier (heliport.core.vocabulary.DATACITE attribute) print_context() (in module heliport.cwl_execution.cwl_helpers.cwl2rdf) PRIVATE (heliport.core.models.DigitalObject.ObjectPermissions attribute) PRIVATE_KEY_PATH (heliport.core.conf.HeliportHandlesAppConf attribute) PRO (class in heliport.core.vocabulary) process_response() (heliport.core.middleware.never_cache_middleware.DisableClientSideCachingMiddleware method) PRODUCER (heliport.core.models.Contribution.ContributionTypes attribute) producer (heliport.core.vocabulary.PRO attribute) profiling (heliport.cwl_execution.models.ExecutionLog property) Project (class in heliport.core.models) project (heliport.core.models.DigitalObject attribute) PROJECT (heliport.core.models.DigitalObject.ObjectPermissions attribute) project (heliport.core.models.TimelineConfiguration attribute) Project (heliport.core.models.Vocabulary attribute) Project.DoesNotExist Project.MultipleObjectsReturned project_attributes() (in module heliport.core.serializers) project_id (heliport.core.models.Project attribute) (heliport.core.models.TimelineConfiguration attribute) PROJECT_LEADER (heliport.core.models.Contribution.ContributionTypes attribute) PROJECT_MANAGER (heliport.core.models.Contribution.ContributionTypes attribute) PROJECT_MEMBER (heliport.core.models.Contribution.ContributionTypes attribute) project_set (heliport.core.models.Group attribute) ProjectAdmin (class in heliport.core.admin) ProjectConfigurationModule (class in heliport.core.interface) ProjectCreateView (class in heliport.gate_connection.views) ProjectDATACITESerializer (class in heliport.core.serializers) ProjectGraphView (class in heliport.core.views) ProjectJobsView (class in heliport.unicore.views) ProjectListView (class in heliport.core.views) projects (heliport.core.models.DigitalObject attribute) (heliport.cwl_execution.models.UserJobConfig property) projects_is_public (heliport.core.models.DigitalObject attribute) projects_of() (in module heliport.core.permissions) projects_per_page (heliport.version_control.views.VersionControlView attribute) ProjectSerializer (class in heliport.core.serializers) ProjectSerializer.Meta (class in heliport.core.serializers) ProjectSerializeTest (class in heliport.archive.tests) (class in heliport.data_management_plan.tests) (class in heliport.documentation.tests) (class in heliport.publication.tests) ProjectT (class in heliport.core.attribute_description) ProjectTimelineView (class in heliport.core.views) ProjectUpdateView (class in heliport.core.views) ProjectView (class in heliport.core.views) ProjectViewSet (class in heliport.core.views) Property (heliport.core.models.Vocabulary attribute) property (heliport.digital_objects.models.PropertyPath attribute) property_category (heliport.core.attribute_description.BaseAttribute property) (heliport.core.attribute_description.BoundAttribute property) property_id (heliport.core.attribute_description.BoundAttribute property) (heliport.digital_objects.models.PropertyPath attribute) property_in_reverse (heliport.digital_objects.models.PropertyPath attribute) property_path_id (heliport.digital_objects.models.PropertyPath attribute) PropertyList (class in heliport.core.vocabulary_descriptor) PropertyPath (class in heliport.digital_objects.models) PropertyPath.DoesNotExist PropertyPath.MultipleObjectsReturned propertypath_set (heliport.core.models.DigitalObject attribute) (heliport.digital_objects.models.PropertyPath attribute) proposal (heliport.gate_connection.models.GateProject attribute) ProposalManager (class in heliport.gate_connection.proposal_management.hzdr_gate_proposal_management) ProposalQueries (class in heliport.gate_connection.models) ProposalUserQueries (class in heliport.gate_connection.models) proposer (heliport.gate_connection.models.GateProject property) protocol (heliport.data_source.models.DataSource property) PROTOCOL_CHOICES (heliport.data_source.models.DataSource attribute) protocol_path (heliport.data_source.models.DataSource property) PUBLIC (heliport.core.models.DigitalObject.ObjectPermissions attribute) PUBLIC_FAVICON_URL (heliport.core.conf.HeliportAppConf attribute) public_settable (heliport.core.attribute_description.BoundAttribute property) public_settable() (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.DynamicAttribute method) Publication (class in heliport.publication.models) publication (heliport.core.models.DigitalObject attribute) Publication.DoesNotExist Publication.MultipleObjectsReturned publication_id (heliport.publication.models.Publication attribute) PublicationConfig (class in heliport.publication.apps) PublicationDATACITESerializer (class in heliport.publication.serializers) PublicationModule (class in heliport.publication.interface) PublicationSerializer (class in heliport.publication.serializers) PublicationSerializer.Meta (class in heliport.publication.serializers) PublicationTests (class in heliport.publication.tests) (class in heliport.version_control.tests) PublicationView (class in heliport.publication.views) PublicationViewSet (class in heliport.publication.views) PublicationWorkflowCreateView (class in heliport.cwl_execution.views) PublicLandingPageView (class in heliport.core.views) purl (heliport.core.vocabulary.DATACITE attribute) put() (heliport.core.utils.handles.HandleServer method)

Q

query() (heliport.core.models.MetadataField method) query_relations() (heliport.digital_objects.views.ObjectGraphView method)

queryset (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.UserViewSet attribute)

R

raise_exception (heliport.core.custom_views.HeliportLoginRequiredMixin attribute) rdf_triples (heliport.core.attribute_description.BoundAttribute property) rdf_triples() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.BasicLiteralType method) (heliport.core.attribute_description.BasicObjType method) (heliport.core.attribute_description.EnumStringT method) (heliport.core.attribute_description.ListT method) (heliport.core.attribute_description.UriRefT method) (heliport.core.attribute_description.UrlT method) RDFSerializer (class in heliport.core.serializers) RdfXmlRenderer (class in heliport.core.serializers) read_only (heliport.core.attribute_description.BaseAttribute property) read_only_attrs (heliport.core.serializers.MetadataRestField property) read_output() (heliport.core.utils.command_line_execution.ShellSSHCommandExecutor method) ready() (heliport.core.apps.HeliportConfig method) (heliport.cwl_execution.apps.CwlExecutionConfig method) (heliport.gate_connection.apps.GateConnectionConfig method) (heliport.unicore.apps.UnicoreConfig method) redirect_part() (heliport.cwl_execution.views.ExecutableRawYamlView static method) RedocView (class in heliport.core.views) register() (heliport.utils.collections.DecoratorDict method) (heliport.utils.collections.DecoratorIndex method) (heliport.utils.collections.DecoratorList method) register_actions() (heliport.core.custom_views.HeliportObjectListView method) register_columns() (heliport.core.custom_views.HeliportObjectListView method) register_digital_object_attributes() (in module heliport.core.serializers) register_form_columns() (heliport.core.custom_views.HeliportObjectListView method) (heliport.core.views.TagsView method) register_handle (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.publication.views.PublicationView attribute) register_handle() (heliport.core.models.DigitalObject method) (heliport.digital_objects.views.DigitalObjectViewSet method) (in module heliport.core.utils.handles) register_handle_if_applicable() (heliport.core.models.DigitalObject method) REGISTER_HANDLES (heliport.core.conf.HeliportHandlesAppConf attribute) register_json_handle() (in module heliport.core.utils.handles) REGISTER_JSON_URL_HANDLES (heliport.core.conf.HeliportHandlesAppConf attribute) RegisterView (class in heliport.core.views) REGISTRATION_AGENCY (heliport.core.models.Contribution.ContributionTypes attribute) REGISTRATION_AUTHORITY (heliport.core.models.Contribution.ContributionTypes attribute) related_identifiers() (heliport.core.serializers.DATACITESerializer method) (heliport.core.serializers.DigitalObjectDATACITESerializer method) (heliport.core.serializers.ProjectDATACITESerializer method) (heliport.cwl_execution.serializers.JobDATACITESerializer method) RELATED_PERSON (heliport.core.models.Contribution.ContributionTypes attribute) relatesToDocument (heliport.core.vocabulary.PRO attribute) relatesToOrganization (heliport.core.vocabulary.PRO attribute) relations (heliport.core.models.DigitalObject attribute) RelationTriple (class in heliport.core.vocabulary_descriptor) relative_url (heliport.core.models.DigitalObject property) RemoteServerLoginView (class in heliport.core.views) RemoteServerLogoutView (class in heliport.core.views) remove() (heliport.utils.collections.IndexedSet method) remove_action() (heliport.utils.table_description.TableDescription method) remove_column() (heliport.utils.form_description.FormDescription method) (heliport.utils.table_description.TableDescription method) remove_prefix() (in module heliport.utils.string_tools) remove_special_chars() (in module heliport.core.utils.IDs) rename() (heliport.core.utils.json_ld.LdContext method) (heliport.core.utils.json_ld.LdContextEntry method) render() (heliport.core.serializers.DataCiteJSONRenderer static method) (heliport.core.serializers.DataCiteRenderer static method) (heliport.core.serializers.HtmlRenderer class method) (heliport.core.serializers.JsonLdRenderer class method) (heliport.core.serializers.LandingPageRenderer class method) (heliport.core.serializers.RdfXmlRenderer static method) (heliport.core.serializers.TripleRenderer static method) (heliport.core.serializers.TurtleRenderer static method)

render_empty_input() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.ListT method) render_form_inputs() (heliport.core.serializers.MetadataBoundField method) render_new_input() (heliport.core.serializers.MetadataRestField method) repeat (heliport.cwl_execution.models.Job attribute) repec (heliport.core.vocabulary.DATACITE attribute) replace_if_exists (heliport.core.models.Image attribute) RepoDATACITESerializer (class in heliport.version_control.serializers) Repository (heliport.core.vocabulary.FABIO attribute) require_content_type() (in module heliport.unicore.decorators) requires_type (heliport.core.models.Tag attribute) requires_type_display (heliport.core.models.Tag property) requires_type_id (heliport.core.models.Tag attribute) RESEARCH_GROUP (heliport.core.models.Contribution.ContributionTypes attribute) RESEARCHER (heliport.core.models.Contribution.ContributionTypes attribute) researcherid (heliport.core.vocabulary.DATACITE attribute) resolve_conflicts() (heliport.core.utils.json_ld.LdContext method) RESOLVE_PID_FORMAT_TO (heliport.core.conf.HeliportHandlesAppConf attribute) resource_id (heliport.unicore.models.UnicoreResource attribute) resource_type() (heliport.archive.serializers.ArchiveDATACITESerializer method) (heliport.core.serializers.DATACITESerializer method) (heliport.core.serializers.DigitalObjectDATACITESerializer method) (heliport.core.serializers.ImageDATACITESerializer method) (heliport.core.serializers.ProjectDATACITESerializer method) (heliport.cwl_execution.serializers.ExecutableDATACITESerializer method) (heliport.cwl_execution.serializers.JobDATACITESerializer method) (heliport.data_management_plan.serializers.DmpDATACITESerializer method) (heliport.documentation.serializers.DocumentationDATACITESerializer method) (heliport.publication.serializers.PublicationDATACITESerializer method) (heliport.sharelatex.serializers.TexDATACITESerializer method) (heliport.version_control.serializers.RepoDATACITESerializer method) resource_type_dict() (heliport.core.serializers.DATACITESerializer method) resource_url (heliport.unicore.models.UnicoreResource attribute) ResourceIdentifier (heliport.core.vocabulary.DATACITE attribute) ResourceIdentifierScheme (heliport.core.vocabulary.DATACITE attribute) responsible_experimentalist (heliport.gate_connection.models.GateProject attribute) responsible_experimentalist_id (heliport.gate_connection.models.GateProject attribute) REST_CORE_URL (heliport.unicore.conf.UnicoreAppConf attribute) restricted (heliport.gate_connection.models.GateProject attribute) result (heliport.core.utils.command_line_execution.CommandResults property) retrieve_token() (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.HZDRGateProposalManager method) reverse (heliport.digital_objects.views.DigitalObjectPropertiesView.AttributeInfo attribute) reverse_context_mapping() (in module heliport.core.utils.json_ld) reverse_relations (heliport.core.models.DigitalObject attribute) rgb_color (heliport.core.models.Tag property) RIGHTS_HOLDER (heliport.core.models.Contribution.ContributionTypes attribute) RoleInTime (heliport.core.vocabulary.PRO attribute) ror (heliport.core.vocabulary.DATACITE attribute) row (heliport.tables.models.TableCell attribute) row_id (heliport.tables.models.TableCell attribute) (heliport.tables.models.TableRow attribute) row_list (heliport.utils.table_description.TableDescription property) run() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) run_cwl_tool() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) RUNNING (heliport.cwl_execution.models.Job.StatusCodes attribute) RunningJobsView (class in heliport.cwl_execution.views)

S

save() (in module heliport.cwl_execution.cwl_helpers.cwl_execution) save_connect() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) save_get() (in module heliport.digital_objects.views) save_metadata() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) save_profiling() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) save_proposal() (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.HZDRGateProposalManager method) (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.ProposalManager method) save_to() (heliport.gate_connection.proposal_management.gate_user_management.GateUser method) (heliport.gate_connection.proposal_management.ldap_user_management.LDAPUser method) (heliport.gate_connection.proposal_management.user_management.User method) save_with_handle() (heliport.core.models.DigitalObject method) SaveCategoryView (class in heliport.digital_objects.views) search_fields (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute) SearchAndAPITest (class in heliport.data_management_plan.tests) (class in heliport.digital_objects.tests) (class in heliport.documentation.tests) (class in heliport.publication.tests) (class in heliport.version_control.tests) SearchBaseView (class in heliport.core.views) SearchTest (class in heliport.archive.tests) (class in heliport.core.tests) SearchView (class in heliport.archive.views) (class in heliport.core.views) (class in heliport.cwl_execution.views) (class in heliport.data_management_plan.views) (class in heliport.data_source.views) (class in heliport.digital_objects.views) (class in heliport.documentation.views) (class in heliport.gate_connection.views) (class in heliport.publication.views) (class in heliport.sharelatex.views) (class in heliport.version_control.views) seconds_since_start (heliport.cwl_execution.models.ExecutionLog property) select_renderer() (in module heliport.core.serializers) SemanticDesktop (class in heliport.core.vocabulary) SemanticDesktop.NFO (class in heliport.core.vocabulary) SemanticDesktop.NIE (class in heliport.core.vocabulary) separate_prefix() (in module heliport.cwl_execution.cwl_helpers.cwl_generation) serialize() (heliport.cwl_execution.views.JobParameterValueView static method) serialize_digital_object() (heliport.digital_objects.views.DigitalObjectPropertiesView static method) serialize_project() (in module heliport.archive.interface) (in module heliport.core.interface) (in module heliport.cwl_execution.interface) (in module heliport.data_management_plan.interface) (in module heliport.data_source.interface) (in module heliport.digital_objects.interface) (in module heliport.documentation.interface) (in module heliport.gate_connection.interface) (in module heliport.publication.interface) (in module heliport.sharelatex.interface) (in module heliport.version_control.interface) serialize_project_data() (in module heliport.core.app_interaction) serialize_results() (heliport.digital_objects.views.DigitalObjectPropertiesView class method) serializer_class (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ContributionViewSet attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute) SERVER_DN (heliport.unicore.conf.UnicoreAppConf attribute) SERVER_PUBLIC_KEY (heliport.unicore.conf.UnicoreAppConf attribute) SERVER_URL (heliport.core.conf.HeliportHandlesAppConf attribute) session (heliport.gate_connection.proposal_management.hzdr_gate_proposal_management.ProposalManager attribute) set_attribs() (in module heliport.core.vocabulary_core) set_attrs_job() (in module heliport.cwl_execution.cwl_helpers.cwl_generation) set_identifier() (heliport.core.models.DigitalObject method) set_is_public() (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.DynamicAttribute method) set_key_values() (in module heliport.core.utils.handles) set_orcid() (heliport.core.models.HeliportUser method) set_property() (in module heliport.core.vocabulary_core) set_special_heliport_role() (in module heliport.core.migrations.0011_set_digitalobject_role) set_tokens() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) set_update_attributes() (heliport.core.custom_views.HeliportObjectListView method) (heliport.core.views.TagsView method) set_values() (heliport.core.serializers.DigitalObjectAPISerializer method) (heliport.core.serializers.MetadataRestField method) setattr() (heliport.core.attribute_description.Attribute method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.DynamicAttribute method) (heliport.core.attribute_description.ManyAttribute method) setUp() (heliport.archive.tests.ArchiveTests method) (heliport.archive.tests.ProjectSerializeTest method) (heliport.archive.tests.SearchTest method) (heliport.core.tests.HELIPORTTest method) (heliport.core.tests.WithHeliportUser method) (heliport.cwl_execution.tests.ArbitraryCWLTests method) (heliport.cwl_execution.tests.ToolTests method) (heliport.cwl_execution.tests.WorkflowTests method) (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.data_management_plan.tests.ProjectSerializeTest method) (heliport.data_management_plan.tests.SearchAndAPITest method) (heliport.digital_objects.tests.DigitalObjectTests method) (heliport.digital_objects.tests.SearchAndAPITest method) (heliport.documentation.tests.DocumentationTests method) (heliport.documentation.tests.ProjectSerializeTest method) (heliport.documentation.tests.SearchAndAPITest method) (heliport.publication.tests.ProjectSerializeTest method) (heliport.publication.tests.PublicationTests method) (heliport.publication.tests.SearchAndAPITest method) (heliport.sharelatex.tests.LatexTest method)

setup() (heliport.unicore.mixins.UnicoreMixin method) (heliport.unicore.mixins.UnicoreServerAuthenticationRequiredMixin method) (heliport.unicore.views.ProjectJobsView method) setUp() (heliport.version_control.tests.PublicationTests method) (heliport.version_control.tests.SearchAndAPITest method) setup_command (heliport.cwl_execution.models.Job attribute) setup_new_ssh() (heliport.core.utils.command_line_execution.SSHCommandExecutor method) ShareLaTeX (class in heliport.sharelatex.models) sharelatex (heliport.core.models.DigitalObject attribute) ShareLaTeX.DoesNotExist ShareLaTeX.MultipleObjectsReturned SharelatexConfig (class in heliport.sharelatex.apps) ShareLaTeXModule (class in heliport.sharelatex.interface) ShellSSHCommandExecutor (class in heliport.core.utils.command_line_execution) show_timeline (heliport.core.models.TimelineConfiguration attribute) sici (heliport.core.vocabulary.DATACITE attribute) simple_parameter_value() (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) SingleAssignDict (class in heliport.utils.collections) slurm (heliport.core.models.LoginInfo attribute) source_attrs (heliport.core.serializers.MetadataRestField property) spar (heliport.core.vocabulary.DATACITE attribute) special_heliport_role (heliport.core.models.DigitalObject attribute) (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) split_value_list() (heliport.core.serializers.MetadataRestField method) SPONSOR (heliport.core.models.Contribution.ContributionTypes attribute) srun (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) SSH (heliport.core.models.LoginInfo.LoginTypes attribute) SSH_DATA_TRANSFER_BATCH_SIZE (heliport.cwl_execution.conf.CwlExecutionAppConf attribute) ssh_login (heliport.cwl_execution.models.UserJobConfig attribute) ssh_login_id (heliport.cwl_execution.models.UserJobConfig attribute) SSHCommandExecutor (class in heliport.core.utils.command_line_execution) SSHDataSourceOpenView (class in heliport.data_source.views) StaffOrReadOnly (class in heliport.core.permissions) start (heliport.digital_objects.views.ObjectGraphView.Edge attribute) start() (heliport.cwl_execution.models.ExecutionLog method) start_job() (in module heliport.cwl_execution.views) start_time (heliport.cwl_execution.models.ExecutionLog attribute) static_attributes (in module heliport.core.serializers) static_triples() (heliport.core.serializers.DigitalObjectRDFSerializer static method) (heliport.cwl_execution.serializers.ExecutableRDFSerializer method) status (heliport.core.models.Image attribute) (heliport.core.models.Vocabulary attribute) (heliport.cwl_execution.models.Job attribute) (heliport.gate_connection.models.GateProject attribute) status_result (heliport.core.utils.command_line_execution.CommandResults property) stdout_stderr (heliport.core.utils.command_line_execution.CommandResults property) step_times (heliport.cwl_execution.models.ExecutionLog attribute) stop() (heliport.cwl_execution.models.ExecutionLog method) STOPPED (heliport.cwl_execution.models.Job.StatusCodes attribute) StringT (class in heliport.core.attribute_description) strip_comments() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager static method) sub_path() (heliport.data_source.models.DataSource method) sub_property_of (heliport.core.models.Vocabulary attribute) subclass_of (heliport.core.models.Vocabulary attribute) subclasses_recursive() (heliport.core.tests.APITest method) SubDataSourceCreateView (class in heliport.data_source.views) subject (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) subject_id (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.DigitalObjectRelation attribute) subnamespace_of (heliport.core.models.Vocabulary attribute) SubProjects (class in heliport.core.interface) SubprojectsView (class in heliport.core.views) suffix (heliport.archive.views.ArchiveViewSet attribute) (heliport.core.views.ContributionViewSet attribute) (heliport.core.views.DigitalObjectAPI attribute) (heliport.core.views.GroupViewSet attribute) (heliport.core.views.ProjectViewSet attribute) (heliport.core.views.TokenViewSet attribute) (heliport.core.views.UserViewSet attribute) (heliport.cwl_execution.views.ExecutableViewSet attribute) (heliport.cwl_execution.views.JobViewSet attribute) (heliport.cwl_execution.views.UserJobConfigViewSet attribute) (heliport.data_management_plan.views.DataManagementPlanViewSet attribute) (heliport.data_source.views.DataSourceViewSet attribute) (heliport.digital_objects.views.DigitalObjectRelationViewSet attribute) (heliport.digital_objects.views.DigitalObjectViewSet attribute) (heliport.documentation.views.DocumentationViewSet attribute) (heliport.gate_connection.views.GateProjectViewSet attribute) (heliport.gate_connection.views.GateUserViewSet attribute) (heliport.publication.views.PublicationViewSet attribute) (heliport.sharelatex.views.LatexViewSet attribute) (heliport.version_control.views.VersionControlViewSet attribute) suggested_property (heliport.core.models.Vocabulary attribute) SUPERVISOR (heliport.core.models.Contribution.ContributionTypes attribute) supported (heliport.cwl_execution.cwl_helpers.cwl_parameter.CwlParameter property) sync_from_ldap() (in module heliport.core.migrations.0008_rebuild_group_model) system (heliport.documentation.models.Documentation attribute)

T

Table (class in heliport.tables.models) table (heliport.core.models.DigitalObject attribute) Table.DoesNotExist Table.MultipleObjectsReturned table_id (heliport.tables.models.Table attribute) TableAction (class in heliport.utils.table_description) TableCell (class in heliport.tables.models) TableCell.DoesNotExist TableCell.MultipleObjectsReturned tablecell_set (heliport.core.models.Image attribute) (heliport.tables.models.TableColumn attribute) (heliport.tables.models.TableRow attribute) TableColumn (class in heliport.tables.models) TableColumn.ColumnTypes (class in heliport.tables.models) TableColumn.DoesNotExist TableColumn.MultipleObjectsReturned tablecolumn_set (heliport.tables.models.Table attribute) TableColumnDescription (class in heliport.utils.table_description) TableDataView (class in heliport.tables.views) TableDeleteColumnView (class in heliport.tables.views) TableDeleteRowView (class in heliport.tables.views) TableDescription (class in heliport.utils.table_description) TableEditView (class in heliport.tables.views) TableResetCellView (class in heliport.tables.views) TableRow (class in heliport.tables.models) (class in heliport.utils.table_description) TableRow.DoesNotExist TableRow.MultipleObjectsReturned tablerow_set (heliport.tables.models.Table attribute) Tables (class in heliport.tables.interface) TablesConfig (class in heliport.tables.apps) TablesView (class in heliport.tables.views) TableUpdateColumnView (class in heliport.tables.views) TableUpdateRowView (class in heliport.tables.views) Tag (class in heliport.core.models) tag (heliport.core.models.DigitalObject attribute) Tag.DoesNotExist Tag.MultipleObjectsReturned tag_id (heliport.core.models.Tag attribute) tag_list (heliport.cwl_execution.cwl_helpers.cwl_parameter.ParameterValue property) TagAutocompleteView (class in heliport.core.views) TagJsonView (class in heliport.core.views) Tags (class in heliport.core.interface) tags_where_property (heliport.core.models.DigitalObject attribute) tags_where_type_required (heliport.core.models.DigitalObject attribute) tags_where_value (heliport.core.models.DigitalObject attribute) TagsView (class in heliport.core.views) tail (heliport.digital_objects.models.PropertyPath attribute) tail_id (heliport.digital_objects.models.PropertyPath attribute) TakePictureView (class in heliport.core.views) TargetDescription (class in heliport.core.utils.json_ld) template_name (heliport.archive.views.SearchView attribute) (heliport.core.attribute_description.AttributeType attribute) (heliport.core.attribute_description.DigitalObjectT attribute) (heliport.core.attribute_description.ListT attribute) (heliport.core.attribute_description.ProjectT attribute) (heliport.core.attribute_description.UriRefT attribute) (heliport.core.attribute_description.UrlT attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.CreateProjectView attribute) (heliport.core.views.ImagesView attribute) (heliport.core.views.ImportFromProjectView attribute) (heliport.core.views.LandingPageView attribute) (heliport.core.views.LoginInfoUpdateView attribute) (heliport.core.views.LoginInfoView attribute) (heliport.core.views.LoginView attribute) (heliport.core.views.ProjectGraphView attribute) (heliport.core.views.ProjectListView attribute) (heliport.core.views.ProjectTimelineView attribute) (heliport.core.views.ProjectUpdateView attribute) (heliport.core.views.ProjectView attribute) (heliport.core.views.PublicLandingPageView attribute) (heliport.core.views.RedocView attribute) (heliport.core.views.RegisterView attribute) (heliport.core.views.RemoteServerLoginView attribute) (heliport.core.views.SearchBaseView attribute) (heliport.core.views.SearchView attribute) (heliport.core.views.SubprojectsView attribute) (heliport.core.views.TakePictureView attribute) (heliport.core.views.UserSettingsView attribute) (heliport.cwl_execution.views.ArbitraryCWLListView attribute) (heliport.cwl_execution.views.ArbitraryCWLUpdateView attribute) (heliport.cwl_execution.views.JobCreateView attribute) (heliport.cwl_execution.views.JobDetailView attribute) (heliport.cwl_execution.views.JobListView attribute) (heliport.cwl_execution.views.JobParameterValueView attribute) (heliport.cwl_execution.views.PublicationWorkflowCreateView attribute) (heliport.cwl_execution.views.SearchView attribute) (heliport.cwl_execution.views.ToolCreateView attribute) (heliport.cwl_execution.views.ToolListView attribute) (heliport.cwl_execution.views.ToolUpdateView attribute) (heliport.cwl_execution.views.WorkflowCreateView attribute) (heliport.cwl_execution.views.WorkflowListView attribute) (heliport.cwl_execution.views.WorkflowUpdateView attribute) (heliport.data_management_plan.views.DataManagementPlanUpdateView attribute) (heliport.data_management_plan.views.DataManagementPlanView attribute) (heliport.data_management_plan.views.SearchView attribute) (heliport.data_source.views.DataSourceUpdateView attribute) (heliport.data_source.views.DataSourceView attribute) (heliport.data_source.views.SearchView attribute) (heliport.digital_objects.views.ObjectGraphView attribute) (heliport.digital_objects.views.ObjectsView attribute) (heliport.digital_objects.views.SearchView attribute) (heliport.documentation.views.DocumentationUpdateView attribute) (heliport.documentation.views.DocumentationView attribute) (heliport.documentation.views.SearchView attribute) (heliport.gate_connection.views.ConnectedToGateProjectView attribute) (heliport.gate_connection.views.ConnectToGateProjectView attribute) (heliport.gate_connection.views.SearchView attribute) (heliport.publication.views.SearchView attribute) (heliport.sharelatex.views.SearchView attribute) (heliport.tables.views.TableEditView attribute) (heliport.unicore.views.Overview attribute) (heliport.unicore.views.ProjectJobsView attribute) (heliport.version_control.views.SearchView attribute) (heliport.version_control.views.VersionControlUpdateView attribute) (heliport.version_control.views.VersionControlView attribute) TemplateField (class in heliport.core.serializers) tentative_set() (heliport.core.utils.json_ld.LdContext method) (heliport.core.utils.json_ld.LdContextEntry method) test_access_search() (heliport.archive.tests.SearchTest method) (heliport.core.tests.SearchTest method) (heliport.data_management_plan.tests.SearchAndAPITest method) (heliport.digital_objects.tests.SearchAndAPITest method) (heliport.documentation.tests.SearchAndAPITest method) (heliport.publication.tests.SearchAndAPITest method) (heliport.sharelatex.tests.LatexTest method) (heliport.version_control.tests.SearchAndAPITest method) test_add_protocol_create() (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.documentation.tests.DocumentationTests method) (heliport.version_control.tests.PublicationTests method) test_add_protocol_update() (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.documentation.tests.DocumentationTests method) (heliport.version_control.tests.PublicationTests method) test_add_to_end_of_chain() (heliport.core.tests.LdJsonContextTest method) test_api() (heliport.data_management_plan.tests.SearchAndAPITest method) (heliport.digital_objects.tests.SearchAndAPITest method) (heliport.documentation.tests.SearchAndAPITest method) (heliport.publication.tests.SearchAndAPITest method) (heliport.sharelatex.tests.LatexTest method) (heliport.version_control.tests.SearchAndAPITest method) test_archive_findable() (heliport.archive.tests.SearchTest method) test_as_by_unicore() (heliport.unicore.tests.TestCallbackView method) test_basic_set() (heliport.core.tests.LdJsonContextTest method) test_category_migrated() (heliport.core.models.DigitalObject method) test_chained_renaming() (heliport.core.tests.LdJsonContextTest method) test_concat_base_command() (heliport.cwl_execution.tests.ToolTests method) test_copy_digital_object() (heliport.core.tests.HELIPORTTest method) test_create() (heliport.archive.tests.ArchiveTests method) (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.documentation.tests.DocumentationTests method) (heliport.publication.tests.PublicationTests method) (heliport.sharelatex.tests.LatexTest method) (heliport.version_control.tests.PublicationTests method) test_create_tool_and_update_tool() (heliport.cwl_execution.tests.ToolTests method) (heliport.cwl_execution.tests.WorkflowTests method) test_cwl_to_workflow() (heliport.cwl_execution.tests.WorkflowTests method) test_data_management_plan_findable() (heliport.data_management_plan.tests.SearchAndAPITest method) test_datacite() (heliport.archive.tests.ProjectSerializeTest method) (heliport.data_management_plan.tests.ProjectSerializeTest method) (heliport.documentation.tests.ProjectSerializeTest method) (heliport.publication.tests.ProjectSerializeTest method) (heliport.sharelatex.tests.LatexTest method) test_delete() (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.documentation.tests.DocumentationTests method) (heliport.version_control.tests.PublicationTests method) test_deletion() (heliport.core.tests.APITest method) test_digital_object_api() (heliport.core.tests.APITest method) test_digital_object_autocomplete() (heliport.core.tests.SearchTest method) test_directory_cwl_class() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method)

test_documentation_findable() (heliport.documentation.tests.SearchAndAPITest method) test_exists() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.ListT method) (heliport.core.attribute_description.UrlT method) test_expired_token() (heliport.unicore.tests.TestCallbackView method) test_extract_handle() (heliport.core.tests.HandleServerInteractionTest method) test_findable() (heliport.digital_objects.tests.SearchAndAPITest method) test_func() (heliport.core.custom_views.HeliportObjectListView method) (heliport.core.custom_views.HeliportObjectMixin method) (heliport.core.custom_views.HeliportProjectMixin method) (heliport.core.views.ImportFromProjectView method) test_generate_port_data() (heliport.cwl_execution.tests.WorkflowTests method) test_get_key_values() (heliport.core.tests.HandleServerInteractionTest method) test_group_findable() (heliport.core.tests.SearchTest method) test_handle_registering() (heliport.core.tests.HandleServerInteractionTest method) test_handle_registering_handle_already_exists() (heliport.core.tests.HandleServerInteractionTest method) test_heliport_user_and_project_findable() (heliport.core.tests.SearchTest method) test_id_generation() (heliport.cwl_execution.tests.WorkflowTests method) test_importing_digital_objects() (heliport.core.tests.HELIPORTTest method) test_json_data_url() (heliport.core.tests.HandleServerInteractionTest method) test_json_data_url_local_url() (heliport.core.tests.HandleServerInteractionTest method) test_json_description() (heliport.cwl_execution.tests.ToolTests method) test_json_ld() (heliport.archive.tests.ProjectSerializeTest method) (heliport.data_management_plan.tests.ProjectSerializeTest method) (heliport.documentation.tests.ProjectSerializeTest method) (heliport.publication.tests.ProjectSerializeTest method) (heliport.sharelatex.tests.LatexTest method) test_json_ld_other() (heliport.documentation.tests.ProjectSerializeTest method) test_label_index() (heliport.cwl_execution.tests.WorkflowTests method) test_landing_page_by_persistent_id() (heliport.core.tests.SearchTest method) test_lat_findable() (heliport.sharelatex.tests.LatexTest method) test_list() (heliport.archive.tests.ArchiveTests method) (heliport.cwl_execution.tests.ArbitraryCWLTests method) (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.digital_objects.tests.DigitalObjectTests method) (heliport.documentation.tests.DocumentationTests method) (heliport.publication.tests.PublicationTests method) (heliport.sharelatex.tests.LatexTest method) (heliport.version_control.tests.PublicationTests method) test_list_and_delete() (heliport.cwl_execution.tests.ToolTests method) (heliport.cwl_execution.tests.WorkflowTests method) test_malformed_data() (heliport.unicore.tests.TestCallbackView method) test_match_context() (heliport.core.tests.LdJsonContextTest method) test_missing_jwt_claims() (heliport.unicore.tests.TestCallbackView method) test_missing_slash() (heliport.unicore.tests.TestCallbackView method) test_no_auth() (heliport.unicore.tests.TestCallbackView method) test_node_categorization() (heliport.cwl_execution.tests.WorkflowTests method) test_node_requirement() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) test_node_visualization_data() (heliport.cwl_execution.tests.WorkflowTests method) test_not_post() (heliport.unicore.tests.TestCallbackView method) test_not_public() (heliport.archive.tests.ProjectSerializeTest method) test_post_fail() (heliport.cwl_execution.tests.ArbitraryCWLTests method) test_post_success() (heliport.cwl_execution.tests.ArbitraryCWLTests method) test_project_graph() (heliport.core.tests.HELIPORTTest method) test_publication_findable() (heliport.publication.tests.SearchAndAPITest method) test_query_by_type() (heliport.core.tests.CoreVocabularyTest method) test_remove() (heliport.cwl_execution.tests.ArbitraryCWLTests method) test_rename_keys() (heliport.core.tests.LdJsonContextTest method) test_rest_api() (heliport.archive.tests.ProjectSerializeTest method) (heliport.data_management_plan.tests.ProjectSerializeTest method) (heliport.documentation.tests.ProjectSerializeTest method) (heliport.publication.tests.ProjectSerializeTest method) test_reverse_compatible_with_generation() (heliport.core.tests.LdJsonContextTest method) test_search_valid_redirect_urls() (heliport.core.tests.SearchTest method) test_set_key_values() (heliport.core.tests.HandleServerInteractionTest method) test_simple_api_docu() (heliport.core.tests.HELIPORTTest method) test_split_base_command() (heliport.cwl_execution.tests.ToolTests method) test_token_auth() (heliport.core.tests.APITest method) test_unique_keys() (heliport.core.tests.LdJsonContextTest method) test_unique_labels() (heliport.cwl_execution.tests.WorkflowTests method) test_update() (heliport.data_management_plan.tests.DataManagementPlanTests method) (heliport.documentation.tests.DocumentationTests method) (heliport.version_control.tests.PublicationTests method) test_update_list() (heliport.cwl_execution.tests.ArbitraryCWLTests method) test_update_show() (heliport.cwl_execution.tests.ArbitraryCWLTests method) test_url() (heliport.archive.tests.ArchiveTests method) (heliport.publication.tests.PublicationTests method) test_url_not_in_key_values() (heliport.core.tests.HandleServerInteractionTest method) test_version_control_findable() (heliport.version_control.tests.SearchAndAPITest method) test_vocabularies_exist_and_are_property_or_class() (heliport.core.tests.CoreVocabularyTest method) test_workflow_to_cwl() (heliport.cwl_execution.tests.WorkflowTests method) test_wrong_auth_method() (heliport.unicore.tests.TestCallbackView method) test_wrong_auth_token() (heliport.unicore.tests.TestCallbackView method) test_wrong_content_type() (heliport.unicore.tests.TestCallbackView method) TestCallbackView (class in heliport.unicore.tests) TestJobView (class in heliport.unicore.views) TexDATACITESerializer (class in heliport.sharelatex.serializers) TEXT (heliport.tables.models.TableColumn.ColumnTypes attribute) Timeline (class in heliport.core.interface) timeline_id (heliport.core.models.TimelineConfiguration attribute) TimelineConfiguration (class in heliport.core.models) timelineconfiguration (heliport.core.models.Project attribute) TimelineConfiguration.DoesNotExist TimelineConfiguration.MultipleObjectsReturned TIMESTAMP (heliport.tables.models.TableColumn.ColumnTypes attribute) title (heliport.gate_connection.models.GateProject property) to_datacite() (in module heliport.core.serializers) to_html() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BaseAttribute method) to_id() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BasicObjType method) (heliport.core.attribute_description.ContributionT method) (heliport.core.attribute_description.EnumStringT method) (heliport.core.attribute_description.PersonT method) to_inputs() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.ListT method) to_internal_value() (heliport.core.serializers.MetadataRestField method) (heliport.core.serializers.TemplateField method) to_json() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.BasicObjType method) (heliport.core.attribute_description.ContributionT method) (heliport.core.attribute_description.EnumStringT method) (heliport.core.attribute_description.ListT method) (heliport.core.attribute_description.PersonT method) to_node() (heliport.core.vocabulary_descriptor.TripleDescription static method) to_rdf() (in module heliport.core.serializers) to_rdflib_node() (heliport.core.attribute_description.AttrObj method) (heliport.core.models.Contribution method) (heliport.core.models.DigitalObject method) (heliport.core.models.HeliportUser method) to_representation() (heliport.core.serializers.DigitalObjectListSerializer method) (heliport.core.serializers.MetadataRestField method) (heliport.core.serializers.TemplateField method) to_string() (heliport.core.attribute_description.AttributeType method) (heliport.core.attribute_description.AttrObjT method) (heliport.core.attribute_description.BaseAttribute method) (heliport.core.attribute_description.ContributionT method) (heliport.core.attribute_description.DateT method) (heliport.core.attribute_description.DigitalObjectT method) (heliport.core.attribute_description.EnumStringT method) (heliport.core.attribute_description.ListT method) (heliport.core.attribute_description.ProjectT method) TOKEN (heliport.core.models.LoginInfo.LoginTypes attribute) token_id (heliport.core.models.NamedToken attribute) TokenSerializer (class in heliport.core.serializers) TokenSerializer.Meta (class in heliport.core.serializers) TokenViewSet (class in heliport.core.views) TOOL (heliport.cwl_execution.models.Executable.ExecutableTypes attribute) tool_description_to_cwl() (in module heliport.cwl_execution.cwl_helpers.cwl_tool) ToolCreateView (class in heliport.cwl_execution.views) ToolJsonDescriptionView (class in heliport.cwl_execution.views) ToolListView (class in heliport.cwl_execution.views) ToolModule (class in heliport.cwl_execution.interface) ToolTests (class in heliport.cwl_execution.tests) ToolUpdateView (class in heliport.cwl_execution.views) transfer_cwl() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) transfer_data_source() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) transfer_ssh_data_source() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager method) TripleDescription (class in heliport.core.vocabulary_descriptor) TripleRenderer (class in heliport.core.serializers) triples() (heliport.core.serializers.AttrObjRDFSerializer method) (heliport.core.serializers.ContributionRDFSerializer method) (heliport.core.serializers.DigitalObjectRDFSerializer method) (heliport.core.serializers.RDFSerializer method) (heliport.core.serializers.UserRDFSerializer method) try_int() (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) TurtleRenderer (class in heliport.core.serializers) twitter (heliport.core.vocabulary.DATACITE attribute) type (heliport.core.models.Contribution attribute) (heliport.core.models.LoginInfo attribute) (heliport.core.models.Vocabulary attribute) (heliport.cwl_execution.models.Executable attribute) type2role() (heliport.core.serializers.ContributionRDFSerializer static method) type_count (heliport.cwl_execution.cwl_helpers.cwl_parameter.CwlParameter property) type_from_str() (heliport.core.models.Contribution class method) type_type (heliport.cwl_execution.cwl_helpers.cwl_parameter.CwlParameter property) TypeAttribute (class in heliport.core.attribute_description) types() (in module heliport.core.serializers)

U

unbound() (heliport.utils.form_description.FormColumn method) UNDEFINED (heliport.cwl_execution.models.Job.OutputCodes attribute) Unicore (class in heliport.unicore.interface) UnicoreAppConf (class in heliport.unicore.conf) UnicoreAppConf.Meta (class in heliport.unicore.conf) UnicoreConfig (class in heliport.unicore.apps) UnicoreMixin (class in heliport.unicore.mixins) UnicoreProjectJobs (class in heliport.unicore.interface) UnicoreResource (class in heliport.unicore.models) UnicoreResource.DoesNotExist UnicoreResource.MultipleObjectsReturned unicoreresource_set (heliport.core.models.Project attribute) UnicoreServerAuthenticationRequiredMixin (class in heliport.unicore.mixins) unset_special_heliport_role() (in module heliport.core.migrations.0011_set_digitalobject_role) unsupported_cwl_str (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property) upc (heliport.core.vocabulary.DATACITE attribute) update() (heliport.core.serializers.DigitalObjectAPISerializer method) (heliport.core.serializers.DigitalObjectListSerializer method) (heliport.core.user_logic.user_information_managers.manager_ldap.LdapUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.BasicUserInformationManager method) (heliport.core.user_logic.user_information_managers.managers.UserInformationManager method) update_gate_database() (heliport.gate_connection.proposal_management.use_cases.UpdateProposalDatabaseUseCase method) update_heading (heliport.core.custom_views.HeliportObjectListView attribute) update_project_groups() (in module heliport.core.migrations.0008_rebuild_group_model) update_renamed_workflow_steps() (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager static method) update_url (heliport.archive.views.ArchiveView attribute) (heliport.core.custom_views.HeliportObjectListView attribute) (heliport.core.views.TagsView attribute) (heliport.digital_objects.views.ObjectGraphListView attribute) (heliport.publication.views.PublicationView attribute) (heliport.sharelatex.views.LaTeXView attribute) (heliport.tables.views.TablesView attribute) update_usage_date() (heliport.core.models.Tag method) update_user() (heliport.gate_connection.models.ProposalUserQueries static method) (heliport.gate_connection.proposal_management.user_management.UserQueries static method) UpdateProposalDatabaseUseCase (class in heliport.gate_connection.proposal_management.use_cases) upload_image() (heliport.core.models.Image method) UPLOADING (heliport.core.models.Image.ImageStates attribute) uri (heliport.core.utils.json_ld.TargetDescription attribute) (heliport.core.vocabulary.DATACITE attribute) (heliport.data_source.models.DataSource attribute) UriRefT (class in heliport.core.attribute_description)

url (heliport.core.vocabulary.DATACITE attribute) url_encode() (in module heliport.utils.url) URL_FORMAT (heliport.core.conf.HeliportHandlesAppConf attribute) url_normalizer() (in module heliport.core.utils.normalization) urls() (heliport.core.views.ProjectViewSet method) UrlT (class in heliport.core.attribute_description) urn (heliport.core.vocabulary.DATACITE attribute) USE_DUMMY_STRING_FOR_UNREGISTERED_HANDLES (heliport.core.conf.HeliportHandlesAppConf attribute) USE_SRUN (heliport.cwl_execution.conf.CwlExecutionAppConf attribute) User (class in heliport.gate_connection.proposal_management.user_management) user (heliport.core.models.LoginInfo attribute) (heliport.core.serializers.DigitalObjectAPISerializer property) (heliport.cwl_execution.cwl_helpers.cwl_execution.CWLExecutorManager property) (heliport.cwl_execution.models.ExecutionLog attribute) USER (heliport.gate_connection.conf.GateConnectionAppConf attribute) user_id (heliport.core.models.HeliportUser attribute) (heliport.core.models.LoginInfo attribute) (heliport.cwl_execution.models.ExecutionLog attribute) user_job_config_id (heliport.cwl_execution.models.UserJobConfig attribute) USER_PASSWORD (heliport.core.models.LoginInfo.LoginTypes attribute) UserInformationManager (class in heliport.core.user_logic.user_information_managers.managers) UserJobConfig (class in heliport.cwl_execution.models) UserJobConfig.DoesNotExist UserJobConfig.MultipleObjectsReturned userjobconfig_set (heliport.core.models.LoginInfo attribute) (heliport.cwl_execution.models.Job attribute) UserJobConfigSerializer (class in heliport.cwl_execution.serializers) UserJobConfigSerializer.Meta (class in heliport.cwl_execution.serializers) UserJobConfigViewSet (class in heliport.cwl_execution.views) UserMessage username (heliport.core.models.LoginInfo attribute) UserQueries (class in heliport.gate_connection.proposal_management.user_management) UserRDFSerializer (class in heliport.core.serializers) UserSerializer (class in heliport.core.serializers) UserSerializer.Meta (class in heliport.core.serializers) UserSettingsView (class in heliport.core.views) UserViewSet (class in heliport.core.views) uses_files() (heliport.cwl_execution.models.Executable method) usesIdentifierScheme (heliport.core.vocabulary.DATACITE attribute) usesMetadataScheme (heliport.core.vocabulary.DATACITE attribute) uuid (heliport.core.models.Contribution attribute) (heliport.core.models.HeliportUser attribute) (heliport.core.models.Project attribute)

V

validate() (heliport.core.serializers.DigitalObjectAPISerializer method) validate_login() (heliport.core.views.RemoteServerLoginView static method) value (heliport.core.attribute_description.BoundAttribute property) (heliport.core.attribute_description.ConstantAttribute attribute) (heliport.core.models.DigitalObjectAttributes attribute) (heliport.core.models.Tag attribute) (heliport.cwl_execution.cwl_helpers.cwl_parameter.AutoValue attribute) (heliport.cwl_execution.cwl_helpers.cwl_parameter.BooleanParameterValue property) (heliport.cwl_execution.cwl_helpers.cwl_parameter.ParameterValue property) value_class (in module heliport.cwl_execution.cwl_helpers.cwl_parameter) value_dict (heliport.core.attribute_description.EnumStringT attribute) value_from() (heliport.core.attribute_description.BaseAttribute method) value_id (heliport.core.models.Tag attribute) value_to() (heliport.core.attribute_description.BaseAttribute method) values (heliport.digital_objects.views.DigitalObjectPropertiesView.AttributeInfo attribute) version_control_id (heliport.version_control.models.VersionControl attribute) VersionControl (class in heliport.version_control.models) versioncontrol (heliport.core.models.DigitalObject attribute) VersionControl.DoesNotExist VersionControl.MultipleObjectsReturned

VersionControlConfig (class in heliport.version_control.apps) VersionControlModule (class in heliport.version_control.interface) VersionControlSerializer (class in heliport.version_control.serializers) VersionControlSerializer.Meta (class in heliport.version_control.serializers) VersionControlUpdateView (class in heliport.version_control.views) VersionControlView (class in heliport.version_control.views) VersionControlViewSet (class in heliport.version_control.views) via (heliport.core.models.LoginInfo attribute) via_id (heliport.core.models.LoginInfo attribute) viaf (heliport.core.vocabulary.DATACITE attribute) visualization (heliport.digital_objects.models.VisualizationEdge attribute) visualization_data_to_cwl() (in module heliport.cwl_execution.cwl_helpers.cwl_workflow) visualization_id (heliport.digital_objects.models.VisualizationEdge attribute) VisualizationDataView (class in heliport.cwl_execution.views) VisualizationEdge (class in heliport.digital_objects.models) VisualizationEdge.DoesNotExist VisualizationEdge.MultipleObjectsReturned visualizationedge_set (heliport.digital_objects.models.ObjectGraph attribute) (heliport.digital_objects.models.PropertyPath attribute) viz (heliport.digital_objects.views.ObjectGraphView.Edge attribute) Vocabulary (class in heliport.core.models)

W

WARNING (heliport.cwl_execution.models.Job.OutputCodes attribute) WIKIDATA (class in heliport.core.vocabulary) wikidata (heliport.core.vocabulary.DATACITE attribute) wikipedia (heliport.core.vocabulary.DATACITE attribute) WithHeliportUser (class in heliport.core.tests) withRole (heliport.core.vocabulary.PRO attribute) WORK_PACKAGE_LEADER (heliport.core.models.Contribution.ContributionTypes attribute) Workflow (heliport.core.vocabulary.FABIO attribute)

WORKFLOW (heliport.cwl_execution.models.Executable.ExecutableTypes attribute) WorkflowCreateView (class in heliport.cwl_execution.views) WorkflowListView (class in heliport.cwl_execution.views) WorkflowModule (class in heliport.cwl_execution.interface) WorkflowTests (class in heliport.cwl_execution.tests) WorkflowUpdateView (class in heliport.cwl_execution.views) writable_attrs (heliport.core.serializers.MetadataRestField property) writable_list_attrs (heliport.core.serializers.MetadataRestField property) writable_single_attrs (heliport.core.serializers.MetadataRestField property)

Y

yaml (heliport.cwl_execution.cwl_helpers.cwl_job.CwlJob property)

YAML (heliport.cwl_execution.models.Executable.CWLTypes attribute)

Z

zbmath (heliport.core.vocabulary.DATACITE attribute)

zip_dict() (in module heliport.core.templatetags.heliport) zip_lists() (in module heliport.core.templatetags.heliport)